RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 PRAMEF27A3QJZ7 478 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 METTL12A8MUP2 240 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 PCDH17O14917 1159 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 PCDHGA12O60330 932 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 CSF2P04141 144 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 CHRM4P08173 479 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 PORP16435 677 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 CCNA2P20248 432 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 ELAVL4P26378 380 aaKnown RBP16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 PRKAR1BP31321 381 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 FMO3P31513 532 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 FASLGP48023 281 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 ALDH6A1Q02252 535 aaKnown RBP16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 CD300LDQ6UXZ3 194 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 C16orf62Q7Z3J2 963 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 CSNK1A1LQ8N752 337 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 FAM81AQ8TBF8 368 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 NIPSNAP1Q9BPW8 284 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 CCDC3Q9BQI4 270 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 RNF6Q9Y252 685 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 FANCMQ8IYD8 2048 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 MDC1Q14676 2089 aaKnown RBP16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 LILRA5A6NI73 299 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 FFAR1O14842 300 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 AK1P00568 194 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 ATP1B1P05026 303 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 ALPPP05187 535 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 OSMP13725 252 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 CPMP14384 443 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 NME1P15531 152 aaKnown RBP16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 KRT20P35900 424 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 ILKQ13418 452 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 RUNX2Q13950 521 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 GANABQ14697 944 aaKnown RBP16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 MFSD12Q6NUT3 480 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 CCDC71Q8IV32 467 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 TOR1AIP2Q8NFQ8 470 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 ZCCHC10Q8TBK6 192 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 DTNBP1Q96EV8 351 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 GIMAP5Q96F15 307 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 FCRL4Q96PJ5 515 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 UCK2Q9BZX2 261 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 CCDC90BQ9GZT6 254 aa16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 TCEAL2Q9H3H9 227 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 PAK1IP1Q9NWT1 392 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC11-204ENST00000505676 ZAR1LA6NP61 321 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 XPNPEP2O43895 674 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 SRPX2O60687 465 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 WBP4O75554 376 aaKnown RBP16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 C8orf89P0DMQ9 161 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 PCSK6P29122 969 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 IFNGR2P38484 337 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 CRISP1P54107 249 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 DUSP2Q05923 314 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 FUT5Q11128 374 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 TCEA2Q15560 299 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 PUS10Q3MIT2 529 aaKnown RBP16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 FGD3Q5JSP0 725 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 SYT6Q5T7P8 510 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 CHRDL2Q6WN34 429 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 DEF8Q6ZN54 512 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 ANKRD13BQ86YJ7 626 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 FAM46DQ8NEK8 389 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 OR9Q2Q8NGE9 314 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 ZNF675Q8TD23 568 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 TRUB1Q8WWH5 349 aaKnown RBP16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 SIGLEC11Q96RL6 698 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 FUZQ9BT04 418 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 LRRC61Q9BV99 259 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 FNDC11Q9BVV2 318 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 POLR2J2Q9GZM3 115 aaKnown RBP16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 POLR2J3Q9H1A7 115 aaKnown RBP16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 RLIMQ9NVW2 624 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 NDOR1Q9UHB4 597 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 PCDHGA10Q9Y5H3 936 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 GALR3O60755 368 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 GSTM3P21266 225 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 CD38P28907 300 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 EPHA2P29317 976 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 RACK1P63244 317 aaKnown RBP16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 EMX1Q04741 257 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 FAR1Q8WVX9 515 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 APH1BQ8WW43 257 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 SLC6A18Q96N87 628 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 ARHGDIGQ99819 225 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 FKBP14Q9NWM8 211 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 WNT16Q9UBV4 365 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 FTSJ1Q9UET6 329 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 C19orf53Q9UNZ5 99 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 SATB2Q9UPW6 733 aa16.22■□□□□ 0.19
TRAPPC11-204ENST00000505676 PLOD3O60568 738 aa16.21■□□□□ 0.19
TRAPPC11-204ENST00000505676 ST13P50502 369 aaKnown RBP16.21■□□□□ 0.19
TRAPPC11-204ENST00000505676 RAB38P57729 211 aa16.21■□□□□ 0.19
TRAPPC11-204ENST00000505676 STARD6P59095 220 aa16.21■□□□□ 0.19
TRAPPC11-204ENST00000505676 CYP27C1Q4G0S4 372 aa16.21■□□□□ 0.19
TRAPPC11-204ENST00000505676 EIPR1Q53HC9 387 aa16.21■□□□□ 0.19
TRAPPC11-204ENST00000505676 FRMPD2BQ6IN97 320 aa16.21■□□□□ 0.19
TRAPPC11-204ENST00000505676 PATE1Q8WXA2 126 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms