RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 PCDHGB4Q9UN71 923 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 CDC14AQ9UNH5 594 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 CORO2BQ9UQ03 480 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 LOXL2Q9Y4K0 774 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 SNX8Q9Y5X2 465 aa9.71□□□□□ -0.86
TPM3-217ENST00000504663 TCRBV16S1A1N1A0A5B0 115 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 H0Y3Z8 333 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 CPNE3O75131 537 aaKnown RBP9.7□□□□□ -0.86
TPM3-217ENST00000504663 FKBP6O75344 327 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 CSO75390 466 aaKnown RBP9.7□□□□□ -0.86
TPM3-217ENST00000504663 SLITRK5O94991 958 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 DLGAP3O95886 979 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 MT-CO3P00414 261 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 CAPNS1P04632 268 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 IL10P22301 178 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 ALAS2P22557 587 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 GALNSP34059 522 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 GPC1P35052 558 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 CHI3L1P36222 383 aaPredicted RBP9.7□□□□□ -0.86
TPM3-217ENST00000504663 MAGEA8P43361 318 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 DSTNP60981 165 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 RBBP4Q09028 425 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 FUT7Q11130 342 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 TP53BP2Q13625 1128 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 LASP1Q14847 261 aaKnown RBP9.7□□□□□ -0.86
TPM3-217ENST00000504663 EXOSC7Q15024 291 aaKnown RBP9.7□□□□□ -0.86
TPM3-217ENST00000504663 TRIP6Q15654 476 aaKnown RBP9.7□□□□□ -0.86
TPM3-217ENST00000504663 CYP51A1Q16850 503 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 IQCCQ4KMZ1 466 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 C6orf163Q5TEZ5 329 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 HEPHL1Q6MZM0 1159 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 HMBOX1Q6NT76 420 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 ERICH5Q6P6B1 374 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 ENPP6Q6UWR7 440 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 DHRS13Q6UX07 377 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 CCDC80Q76M96 950 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 OLIG3Q7RTU3 272 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 SPATA24Q86W54 205 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 PROSER1Q86XN7 944 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 NUP43Q8NFH3 380 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 NFKBIDQ8NI38 313 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 FBXO30Q8TB52 745 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 SLC26A7Q8TE54 656 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 PTPMT1Q8WUK0 201 aaPredicted RBP9.7□□□□□ -0.86
TPM3-217ENST00000504663 RAB8BQ92930 207 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 TAMM41Q96BW9 452 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 OTUB1Q96FW1 271 aaPredicted RBP9.7□□□□□ -0.86
TPM3-217ENST00000504663 NSMCE2Q96MF7 247 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 MS4A4EQ96PG1 132 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 OR7D2Q96RA2 312 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 ALOXE3Q9BYJ1 711 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 VN1R1Q9GZP7 353 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 RUBCNLQ9H714 662 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 MKKSQ9NPJ1 570 aaPredicted RBP9.7□□□□□ -0.86
TPM3-217ENST00000504663 CCM2LQ9NUG4 571 aaPredicted RBP9.7□□□□□ -0.86
TPM3-217ENST00000504663 DCAF13Q9NV06 445 aaKnown RBP9.7□□□□□ -0.86
TPM3-217ENST00000504663 STX18Q9P2W9 335 aaKnown RBP9.7□□□□□ -0.86
TPM3-217ENST00000504663 PRDM4Q9UKN5 801 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 CLCA2Q9UQC9 943 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 MRPS33Q9Y291 106 aaKnown RBP9.7□□□□□ -0.86
TPM3-217ENST00000504663 DTX4Q9Y2E6 619 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 B3GALT1Q9Y5Z6 326 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 ZFHX2Q9C0A1 2572 aaPredicted RBP9.7□□□□□ -0.86
TPM3-217ENST00000504663 DSPPQ9NZW4 1301 aa9.7□□□□□ -0.86
TPM3-217ENST00000504663 TEX51A0A1B0GUA7 166 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 DHRS12A0PJE2 317 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 PRAMEF25A6NGN4 478 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 C9orf172C9J069 976 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 POLR1CO15160 346 aaPredicted RBP9.69□□□□□ -0.86
TPM3-217ENST00000504663 ASNA1O43681 348 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 DDAH2O95865 285 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 IGKV3-11P04433 115 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 FTH1P19P0C7X4 201 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 OR12D1P0DN82 309 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 ANPEPP15144 967 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 SLC7A1P30825 629 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 KDELR2P33947 212 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 CRATP43155 626 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 KHKP50053 298 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 EMDP50402 254 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 SCARB2Q14108 478 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 SPDYE7PQ495Y7 208 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 MTX3Q5HYI7 312 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 RPS26P11Q5JNZ5 115 aaPredicted RBP9.69□□□□□ -0.86
TPM3-217ENST00000504663 HES3Q5TGS1 186 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 CDC73Q6P1J9 531 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 CEACAM20Q6UY09 585 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 NPSR1Q6W5P4 371 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 CBLL1Q75N03 491 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 WDR53Q7Z5U6 358 aaPredicted RBP9.69□□□□□ -0.86
TPM3-217ENST00000504663 TSEN54Q7Z6J9 526 aaKnown RBP9.69□□□□□ -0.86
TPM3-217ENST00000504663 PACS2Q86VP3 889 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 COMTD1Q86VU5 262 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 GALNT12Q8IXK2 581 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 ZNF321PQ8N8H1 164 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 ZNF615Q8N8J6 731 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 ANKFN1Q8N957 763 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 TMEM102Q8N9M5 508 aaPredicted RBP9.69□□□□□ -0.86
TPM3-217ENST00000504663 C11orf65Q8NCR3 313 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 PLPP5Q8NEB5 264 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms