RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 DEFB126Q9BYW3 111 aa12.32□□□□□ -0.44
PDLIM7-212ENST00000504380 TRIM4Q9C037 500 aa12.32□□□□□ -0.44
PDLIM7-212ENST00000504380 SEMA4CQ9C0C4 833 aa12.32□□□□□ -0.44
PDLIM7-212ENST00000504380 OR10A5Q9H207 317 aa12.32□□□□□ -0.44
PDLIM7-212ENST00000504380 CXorf36Q9H7Y0 433 aa12.32□□□□□ -0.44
PDLIM7-212ENST00000504380 ZBTB20Q9HC78 741 aaPredicted RBP12.32□□□□□ -0.44
PDLIM7-212ENST00000504380 COPS7AQ9UBW8 275 aa12.32□□□□□ -0.44
PDLIM7-212ENST00000504380 TNRC6AQ8NDV7 1962 aaKnown RBP12.32□□□□□ -0.44
PDLIM7-212ENST00000504380 PRSS51A0A1B0GVH4 220 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 TMEM200CA6NKL6 621 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 WWP2O00308 870 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 UPK1AO00322 258 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 RNASET2O00584 256 aaKnown RBP12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 ZFAND5O76080 213 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 F10P00742 488 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 IL6P05231 212 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 GSNP06396 782 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 DDX5P17844 614 aaKnown RBP12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 CAPN3P20807 821 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 SOAT1P35610 550 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 KCNK10P57789 538 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 RNF4P78317 190 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 MYBPC3Q14896 1274 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 NNATQ16517 81 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 ANXA8L1Q5VT79 327 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 TCTN3Q6NUS6 607 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 SLC2A7Q6PXP3 512 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 DNAJC14Q6Y2X3 702 aaPredicted RBP12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 HSDL2Q6YN16 418 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 C16orf52Q8NHV5 167 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 TTC9Q92623 222 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 SPDL1Q96EA4 605 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 ART5Q96L15 291 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 YIPF4Q9BSR8 244 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 ZNF552Q9H707 407 aaPredicted RBP12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 SLC52A3Q9NQ40 469 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 EQTNQ9NQ60 294 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 FAM120CQ9NX05 1096 aaKnown RBP12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 PLA2G3Q9NZ20 509 aa12.31□□□□□ -0.44
PDLIM7-212ENST00000504380 CCDC154A6NI56 674 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 PLOD2O00469 737 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 PLOD3O60568 738 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 CEACAM4O75871 244 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 FAM107AO95990 144 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 PDGFAP04085 211 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 EMDP50402 254 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 CASP9P55211 416 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 SOX8P57073 446 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 C19orf57Q0VDD7 668 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 MLC1Q15049 377 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 TLR1Q15399 786 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 DPY19L1Q2PZI1 675 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 SPDYE7PQ495Y7 208 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 GTDC1Q4AE62 458 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 PAGE3Q5JUK9 113 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 IRAK1BP1Q5VVH5 260 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 H3F3CQ6NXT2 135 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 TMEM64Q6YI46 380 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 RPS19BP1Q86WX3 136 aaKnown RBP12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 NATD1Q8N6N6 113 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 EXD3Q8N9H8 876 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 NUP43Q8NFH3 380 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 OR7G1Q8NGA0 311 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 FBXO30Q8TB52 745 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 FAM120BQ96EK7 910 aaKnown RBP12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 OTUB1Q96FW1 271 aaPredicted RBP12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 ABHD17AQ96GS6 310 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 ARHGAP9Q9BRR9 750 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 SLC25A23Q9BV35 468 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 ITPAQ9BY32 194 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 SERHLQ9NQF3 203 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 SLC6A13Q9NSD5 602 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 DDX18Q9NVP1 670 aaKnown RBP12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 C19orf53Q9UNZ5 99 aaPredicted RBP12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 ARL2BPQ9Y2Y0 163 aa12.3□□□□□ -0.44
PDLIM7-212ENST00000504380 A0A087WV62 115 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 LOC100653049A0A140TA62 436 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 CYSRT1A8MQ03 144 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 EMC8O43402 210 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 ZNF354AO60765 605 aaPredicted RBP12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 PRAMEF2O60811 474 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 CCDC22O60826 627 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 KRT34O76011 436 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 ITGB2P05107 769 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 SOX11P35716 441 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 CCT3P49368 545 aaKnown RBP12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 NR0B1P51843 470 aaKnown RBP12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 MLF1P58340 268 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 ZNF155Q12901 538 aaPredicted RBP12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 GAB1Q13480 694 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 RCAN2Q14206 197 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 EBPQ15125 230 aaKnown RBP12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 MAPKAPK3Q16644 382 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 ACER2Q5QJU3 275 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 AGAP7PQ5VUJ5 663 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 JMJD6Q6NYC1 403 aaPredicted RBP12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 ZNF621Q6ZSS3 439 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 SLC29A4Q7RTT9 530 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 TREML1Q86YW5 311 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 PRR22Q8IZ63 422 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms