RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 OR5L2Q8NGL0 311 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 RPLP0P6Q8NHW5 317 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 ZC3H10Q96K80 434 aaKnown RBP15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 BMFQ96LC9 184 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 GLS2Q9UI32 602 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 MAB21L2Q9Y586 359 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 MYH7P12883 1935 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 M0R233 179 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 PHYHO14832 338 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 C1orf189Q5VU69 101 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 LETMD1Q6P1Q0 360 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 PIAS4Q8N2W9 510 aaPredicted RBP15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 FUNDC2Q9BWH2 189 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 BEX2Q9BXY8 128 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 ACTRT3Q9BYD9 372 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 BEX1Q9HBH7 125 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 FXYD6P3P58550 94 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 NNATQ16517 81 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 UAP1L1Q3KQV9 507 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 FIGLAQ6QHK4 219 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 C17orf99Q6UX52 265 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 HMGN2P46Q86SG4 172 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 NAXEQ8NCW5 288 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 PROKR1Q8TCW9 393 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 ATG5Q9H1Y0 275 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 SRA1Q9HD15 236 aaKnown RBP15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 RDH8Q9NYR8 311 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 GSKIPQ9P0R6 139 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 RABL2AQ9UBK7 228 aaPredicted RBP15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 CLEC4EQ9ULY5 219 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 RABL2BQ9UNT1 228 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 SPEF1Q9Y4P9 236 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 OR7A10O76100 309 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 ADH7P40394 386 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 SGCAQ16586 387 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 TTC9BQ8N6N2 239 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 OR4K5Q8NGD3 323 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 TSACCQ96A04 125 aaPredicted RBP15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 URM1Q9BTM9 101 aaKnown RBP15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 SLC5A7Q9GZV3 580 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 RDH14Q9HBH5 336 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 NANSQ9NR45 359 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 BTNL2Q9UIR0 455 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 DRGXA6NNA5 263 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 CLCA1A8K7I4 914 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 PTGS2P35354 604 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 VIPR2P41587 438 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 SOX9P48436 509 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 GK3PQ14409 553 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 ZNF789Q5FWF6 425 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 NDUFAF5Q5TEU4 345 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 FIGNL1Q6PIW4 674 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 TMPRSS12Q86WS5 348 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 DENND6BQ8NEG7 585 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 BADQ92934 168 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 NECTIN4Q96NY8 510 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 POTEKPQ9BYX7 375 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 HOXD1Q9GZZ0 328 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 MYNNQ9NPC7 610 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 MAGED1Q9Y5V3 778 aaPredicted RBP15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 PCDH17O14917 1159 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 RORAP35398 523 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 GPR4P46093 362 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 MTNR1AP48039 350 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 CD97P48960 835 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 DCDC5Q6ZRR9 648 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 TOR1AIP2Q8NFQ8 470 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 NETO1Q8TDF5 533 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 NINJ1Q92982 152 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 BCL7BQ9BQE9 202 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 ZNF350Q9GZX5 532 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 KCNIP3Q9Y2W7 256 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 USP54Q70EL1 1684 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 PCP4L1A6NKN8 68 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 OSMP13725 252 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 LHCGRP22888 699 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 MRPL49Q13405 166 aaKnown RBP15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 CHRFAM7AQ494W8 412 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 SLC5A8Q8N695 610 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 TRIM43Q96BQ3 446 aaPredicted RBP15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 C14orf119Q9NWQ9 140 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 SUSD2Q9UGT4 822 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 SLC7A11Q9UPY5 501 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 TRAPPC13A5PLN9 417 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 SMAD9O15198 467 aaKnown RBP15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 MAN2A2P49641 1150 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 BTBD16Q32M84 506 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 ZNF551Q7Z340 670 aaPredicted RBP15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 STOML3Q8TAV4 291 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 SCML1Q9UN30 329 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 OR1A2Q9Y585 309 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 NWD2Q9ULI1 1742 aa15.73■□□□□ 0.11
PCDHA1-203ENST00000504120 TMEM189-UBE2V1I3L0A0 370 aa15.72■□□□□ 0.11
PCDHA1-203ENST00000504120 RAD51DO75771 328 aa15.72■□□□□ 0.11
PCDHA1-203ENST00000504120 RIDAP52758 137 aaKnown RBP15.72■□□□□ 0.11
PCDHA1-203ENST00000504120 SIM1P81133 766 aaPredicted RBP15.72■□□□□ 0.11
PCDHA1-203ENST00000504120 GRM7Q14831 915 aa15.72■□□□□ 0.11
PCDHA1-203ENST00000504120 TMEM130Q8N3G9 435 aa15.72■□□□□ 0.11
PCDHA1-203ENST00000504120 POGLUT1Q8NBL1 392 aa15.72■□□□□ 0.11
PCDHA1-203ENST00000504120 SLC22A8Q8TCC7 542 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms