RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	BCAS2	O75934	225 aa	Predicted RBP	11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	AVP	P01185	164 aa		11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	CLPS	P04118	112 aa		11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	KLK3	P07288	261 aa	Predicted RBP	11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	NT5E	P21589	574 aa		11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	CHI3L1	P36222	383 aa	Predicted RBP	11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	MAP3K8	P41279	467 aa		11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	MAN2A2	P49641	1150 aa		11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	FOXL2	P58012	376 aa		11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	ELF3	P78545	371 aa	Predicted RBP	11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	PRR5	P85299	388 aa		11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	OCA2	Q04671	838 aa		11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	EEF1A2	Q05639	463 aa	Known RBP	11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	FUT7	Q11130	342 aa		11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	TRAP1	Q12931	704 aa	Known RBP	11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	MINDY4	Q4G0A6	757 aa		11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	TRMT12	Q53H54	448 aa	Known RBP	11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	RNF130	Q86XS8	419 aa		11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	GALNT12	Q8IXK2	581 aa		11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	MICU2	Q8IYU8	434 aa		11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	HORMAD2	Q8N7B1	307 aa		11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	SIMC1	Q8NDZ2	872 aa		11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	NUP43	Q8NFH3	380 aa		11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	PNPT1	Q8TCS8	783 aa	Known RBP	11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	PTPMT1	Q8WUK0	201 aa	Predicted RBP	11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	CCDC124	Q96CT7	223 aa	Known RBP	11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	REXO5	Q96IC2	774 aa	Known RBP	11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	DGAT2	Q96PD7	388 aa		11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	KCTD14	Q9BQ13	255 aa	Predicted RBP	11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	MUC13	Q9H3R2	512 aa		11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	TMEM38A	Q9H6F2	299 aa		11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	ANKRA2	Q9H9E1	313 aa		11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	C3orf14	Q9HBI5	128 aa		11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	NXT1	Q9UKK6	140 aa	Known RBP	11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	CDV3	Q9UKY7	258 aa	Known RBP	11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	MKL2	Q9ULH7	1088 aa		11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	DMXL1	Q9Y485	3027 aa		11.34	□□□□□ -0.59
MATR3-231	ENST00000502394	SDK2	Q58EX2	2172 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	FAM149A	A5PLN7	773 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	CDRT15L2	A8MXV6	281 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	IDS	B3KWA1	339 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	TERT	O14746	1132 aa	Known RBP	11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	OR10H2	O60403	315 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	KLF7	O75840	302 aa	Predicted RBP	11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	RAB40AL	P0C0E4	278 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	ARAF	P10398	606 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	ETFA	P13804	333 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	GGT1	P19440	569 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	TCN1	P20061	433 aa	Predicted RBP	11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	MSX2	P35548	267 aa	Predicted RBP	11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	ACTR3	P61158	418 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	TXNL4A	P83876	142 aa	Known RBP	11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	TP53BP2	Q13625	1128 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	NCF4	Q15080	339 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	ELAVL1	Q15717	326 aa	Known RBP	11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	MAPK11	Q15759	364 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	RSPO4	Q2I0M5	234 aa	Predicted RBP	11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	SPDYE7P	Q495Y7	208 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	LCN8	Q6JVE9	175 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	MFSD12	Q6NUT3	480 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	FAM199X	Q6PEV8	388 aa	Predicted RBP	11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	BHLHB9	Q6PI77	547 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	TMEM205	Q6UW68	189 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	C6orf15	Q6UXA7	325 aa	Predicted RBP	11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	LANCL3	Q6ZV70	420 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	MARCH9	Q86YJ5	346 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	PRSS58	Q8IYP2	241 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	LGI4	Q8N135	537 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	VWA5B2	Q8N398	1253 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	GALNT15	Q8N3T1	639 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	OR2T12	Q8NG77	320 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	MR1	Q95460	341 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	RBM18	Q96H35	190 aa	Known RBP	11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	SLC35G5	Q96KT7	338 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	ZNF578	Q96N58	590 aa	Predicted RBP	11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	MS4A4E	Q96PG1	132 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	PCDHAC1	Q9H158	963 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	SOX17	Q9H6I2	414 aa	Predicted RBP	11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	POLR1B	Q9H9Y6	1135 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	ADAP2	Q9NPF8	381 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	DDX18	Q9NVP1	670 aa	Known RBP	11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	ACTR3B	Q9P1U1	418 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	SNX13	Q9Y5W8	968 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	PTPRB	P23467	1997 aa		11.33	□□□□□ -0.6
MATR3-231	ENST00000502394	ELOVL7	A1L3X0	281 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	PRAMEF27	A3QJZ7	478 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	11.32	□□□□□ -0.6
MATR3-231	ENST00000502394		C9J4A7	227 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	HRK	O00198	91 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	HMGN4	O00479	90 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	ARPC2	O15144	300 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	SIAH2	O43255	324 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	ALOX12B	O75342	701 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	CIB2	O75838	187 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	TNFSF15	O95150	251 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	DDAH2	O95865	285 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	IGKV3-11	P04433	115 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	HMGN2	P05204	90 aa	Known RBP	11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	UMOD	P07911	640 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	ATP6V1B2	P21281	511 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms