RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 NCCRP1Q6ZVX7 275 aaPredicted RBP16.93■□□□□ 0.3
HOXD11-202ENST00000498438 TRIM46Q7Z4K8 759 aa16.93■□□□□ 0.3
HOXD11-202ENST00000498438 MRGPRGQ86SM5 289 aa16.93■□□□□ 0.3
HOXD11-202ENST00000498438 FAM109AQ8N4B1 249 aa16.93■□□□□ 0.3
HOXD11-202ENST00000498438 ZNF808Q8N4W9 903 aaPredicted RBP16.93■□□□□ 0.3
HOXD11-202ENST00000498438 SIMC1Q8NDZ2 872 aa16.93■□□□□ 0.3
HOXD11-202ENST00000498438 C17orf47Q8NEP4 570 aa16.93■□□□□ 0.3
HOXD11-202ENST00000498438 CDC26Q8NHZ8 85 aa16.93■□□□□ 0.3
HOXD11-202ENST00000498438 FAM57AQ8TBR7 257 aa16.93■□□□□ 0.3
HOXD11-202ENST00000498438 CTHRC1Q96CG8 243 aa16.93■□□□□ 0.3
HOXD11-202ENST00000498438 ITPAQ9BY32 194 aa16.93■□□□□ 0.3
HOXD11-202ENST00000498438 SLC17A7Q9P2U7 560 aa16.93■□□□□ 0.3
HOXD11-202ENST00000498438 CNOT11Q9UKZ1 510 aaKnown RBP16.93■□□□□ 0.3
HOXD11-202ENST00000498438 ENTPD4Q9Y227 616 aa16.93■□□□□ 0.3
HOXD11-202ENST00000498438 POLR3HQ9Y535 204 aaPredicted RBP16.93■□□□□ 0.3
HOXD11-202ENST00000498438 NPFFR2Q9Y5X5 522 aa16.93■□□□□ 0.3
HOXD11-202ENST00000498438 LIPGQ9Y5X9 500 aa16.93■□□□□ 0.3
HOXD11-202ENST00000498438 PTGDR2Q9Y5Y4 395 aa16.93■□□□□ 0.3
HOXD11-202ENST00000498438 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.93■□□□□ 0.3
HOXD11-202ENST00000498438 NCKAP5O14513 1909 aa16.92■□□□□ 0.3
HOXD11-202ENST00000498438 GSTM5P46439 218 aa16.92■□□□□ 0.3
HOXD11-202ENST00000498438 NRG3P56975 720 aa16.92■□□□□ 0.3
HOXD11-202ENST00000498438 FBXW4P57775 412 aa16.92■□□□□ 0.3
HOXD11-202ENST00000498438 NNATQ16517 81 aa16.92■□□□□ 0.3
HOXD11-202ENST00000498438 HYAL4Q2M3T9 481 aa16.92■□□□□ 0.3
HOXD11-202ENST00000498438 TRMT12Q53H54 448 aaKnown RBP16.92■□□□□ 0.3
HOXD11-202ENST00000498438 ZNF628Q5EBL2 1059 aa16.92■□□□□ 0.3
HOXD11-202ENST00000498438 PAOXQ6QHF9 649 aa16.92■□□□□ 0.3
HOXD11-202ENST00000498438 CCDC116Q8IYX3 515 aa16.92■□□□□ 0.3
HOXD11-202ENST00000498438 PRR22Q8IZ63 422 aa16.92■□□□□ 0.3
HOXD11-202ENST00000498438 MREGQ8N565 214 aa16.92■□□□□ 0.3
HOXD11-202ENST00000498438 OR52R1Q8NGF1 315 aa16.92■□□□□ 0.3
HOXD11-202ENST00000498438 ZNF675Q8TD23 568 aa16.92■□□□□ 0.3
HOXD11-202ENST00000498438 TRMOQ9BU70 441 aa16.92■□□□□ 0.3
HOXD11-202ENST00000498438 MECRQ9BV79 373 aa16.92■□□□□ 0.3
HOXD11-202ENST00000498438 PARD6BQ9BYG5 372 aa16.92■□□□□ 0.3
HOXD11-202ENST00000498438 NXF5Q9H1B4 397 aaKnown RBP16.92■□□□□ 0.3
HOXD11-202ENST00000498438 PROK2Q9HC23 129 aa16.92■□□□□ 0.3
HOXD11-202ENST00000498438 RRAGDQ9NQL2 400 aaPredicted RBP16.92■□□□□ 0.3
HOXD11-202ENST00000498438 GIMAP4Q9NUV9 329 aa16.92■□□□□ 0.3
HOXD11-202ENST00000498438 CNIH4Q9P003 139 aa16.92■□□□□ 0.3
HOXD11-202ENST00000498438 CFL2Q9Y281 166 aa16.92■□□□□ 0.3
HOXD11-202ENST00000498438 FIS1Q9Y3D6 152 aa16.92■□□□□ 0.3
HOXD11-202ENST00000498438 CACNA1CQ13936 2221 aa16.92■□□□□ 0.3
HOXD11-202ENST00000498438 ATP6AP2A0A1C7CYW4 349 aa16.91■□□□□ 0.3
HOXD11-202ENST00000498438 LRRC3CA6NJW4 275 aa16.91■□□□□ 0.3
HOXD11-202ENST00000498438 CAPN14A8MX76 684 aa16.91■□□□□ 0.3
HOXD11-202ENST00000498438 ESPNB1AK53 854 aa16.91■□□□□ 0.3
HOXD11-202ENST00000498438 PRSS44E7EML9 344 aa16.91■□□□□ 0.3
HOXD11-202ENST00000498438 E9PLN8 166 aa16.91■□□□□ 0.3
HOXD11-202ENST00000498438 ADAM10O14672 748 aa16.91■□□□□ 0.3
HOXD11-202ENST00000498438 TP53I11O14683 189 aa16.91■□□□□ 0.3
HOXD11-202ENST00000498438 AZIN1O14977 448 aa16.91■□□□□ 0.3
HOXD11-202ENST00000498438 ATP6AP2O75787 350 aa16.91■□□□□ 0.3
HOXD11-202ENST00000498438 CELA3AP09093 270 aa16.91■□□□□ 0.3
HOXD11-202ENST00000498438 DDCP20711 480 aa16.91■□□□□ 0.3
HOXD11-202ENST00000498438 ALDH3A1P30838 453 aa16.91■□□□□ 0.3
HOXD11-202ENST00000498438 TMED10P49755 219 aaKnown RBP16.91■□□□□ 0.3
HOXD11-202ENST00000498438 SAMD14Q8IZD0 417 aaPredicted RBP16.91■□□□□ 0.3
HOXD11-202ENST00000498438 OR9A2Q8NGT5 310 aa16.91■□□□□ 0.3
HOXD11-202ENST00000498438 TCP10LQ8TDR4 215 aa16.91■□□□□ 0.3
HOXD11-202ENST00000498438 DIO2Q92813 273 aa16.91■□□□□ 0.3
HOXD11-202ENST00000498438 SMC6Q96SB8 1091 aa16.91■□□□□ 0.3
HOXD11-202ENST00000498438 DMRTA2Q96SC8 542 aa16.91■□□□□ 0.3
HOXD11-202ENST00000498438 VKORC1Q9BQB6 163 aa16.91■□□□□ 0.3
HOXD11-202ENST00000498438 ZNF703Q9H7S9 590 aaPredicted RBP16.91■□□□□ 0.3
HOXD11-202ENST00000498438 SLC35C2Q9NQQ7 365 aa16.91■□□□□ 0.3
HOXD11-202ENST00000498438 EHD3Q9NZN3 535 aa16.91■□□□□ 0.3
HOXD11-202ENST00000498438 BOKQ9UMX3 212 aaPredicted RBP16.91■□□□□ 0.3
HOXD11-202ENST00000498438 CCL27Q9Y4X3 112 aa16.91■□□□□ 0.3
HOXD11-202ENST00000498438 CELSR2Q9HCU4 2923 aa16.9■□□□□ 0.3
HOXD11-202ENST00000498438 CACNA1DQ01668 2161 aa16.9■□□□□ 0.3
HOXD11-202ENST00000498438 IGHG3P01860 377 aa16.9■□□□□ 0.3
HOXD11-202ENST00000498438 CHRNGP07510 517 aa16.9■□□□□ 0.3
HOXD11-202ENST00000498438 ABCD3P28288 659 aa16.9■□□□□ 0.3
HOXD11-202ENST00000498438 SMSP52788 366 aa16.9■□□□□ 0.3
HOXD11-202ENST00000498438 C2orf80Q0P641 193 aa16.9■□□□□ 0.3
HOXD11-202ENST00000498438 ART3Q13508 389 aa16.9■□□□□ 0.3
HOXD11-202ENST00000498438 CEBPEQ15744 281 aa16.9■□□□□ 0.3
HOXD11-202ENST00000498438 KANK2Q63ZY3 851 aa16.9■□□□□ 0.3
HOXD11-202ENST00000498438 BICRALQ6AI39 1079 aa16.9■□□□□ 0.3
HOXD11-202ENST00000498438 FAM71E1Q6IPT2 247 aa16.9■□□□□ 0.3
HOXD11-202ENST00000498438 EID3Q8N140 333 aa16.9■□□□□ 0.3
HOXD11-202ENST00000498438 FAM76AQ8TAV0 307 aa16.9■□□□□ 0.3
HOXD11-202ENST00000498438 SPPL2AQ8TCT8 520 aa16.9■□□□□ 0.3
HOXD11-202ENST00000498438 KAT2AQ92830 837 aa16.9■□□□□ 0.3
HOXD11-202ENST00000498438 JSRP1Q96MG2 331 aaPredicted RBP16.9■□□□□ 0.3
HOXD11-202ENST00000498438 DOHHQ9BU89 302 aa16.9■□□□□ 0.3
HOXD11-202ENST00000498438 TMEM109Q9BVC6 243 aa16.9■□□□□ 0.3
HOXD11-202ENST00000498438 ANKRA2Q9H9E1 313 aa16.9■□□□□ 0.3
HOXD11-202ENST00000498438 ZFP64Q9NPA5 681 aa16.9■□□□□ 0.3
HOXD11-202ENST00000498438 MYNNQ9NPC7 610 aa16.9■□□□□ 0.3
HOXD11-202ENST00000498438 PRODH2Q9UF12 536 aa16.9■□□□□ 0.3
HOXD11-202ENST00000498438 ITPR2Q14571 2701 aa16.89■□□□□ 0.29
HOXD11-202ENST00000498438 NPIPA2E9PIF3 369 aa16.89■□□□□ 0.29
HOXD11-202ENST00000498438 NPIPA3F8WFD2 350 aa16.89■□□□□ 0.29
HOXD11-202ENST00000498438 NPHS1O60500 1241 aa16.89■□□□□ 0.29
HOXD11-202ENST00000498438 RFPL3SP0C7P2 107 aa16.89■□□□□ 0.29
HOXD11-202ENST00000498438 CREB1P16220 341 aa16.89■□□□□ 0.29
HOXD11-202ENST00000498438 EMDP50402 254 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms