RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 ARNTL2Q8WYA1 636 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 LZICQ8WZA0 190 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 PEX13Q92968 403 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 HDAC11Q96DB2 347 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 DUS3LQ96G46 650 aaKnown RBP4.36□□□□□ -1.71
SSR3-209ENST00000498205 TSGA13Q96PP4 275 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 NPY6RQ99463 290 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 HNRNPABQ99729 332 aaKnown RBP4.36□□□□□ -1.71
SSR3-209ENST00000498205 IL22Q9GZX6 179 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 CCDC68Q9H2F9 335 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 Q9H521 79 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 SMYD3Q9H7B4 428 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 ZNF696Q9H7X3 374 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 VCX3AQ9NNX9 186 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 DMAP1Q9NPF5 467 aaPredicted RBP4.36□□□□□ -1.71
SSR3-209ENST00000498205 GIMAP4Q9NUV9 329 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 DPP3Q9NY33 737 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 STAP1Q9ULZ2 295 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 SLC7A7Q9UM01 511 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 MAD1L1Q9Y6D9 718 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 COMMD3-BMI1R4GMX3 469 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 TSC2P49815 1807 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 SCN1AP35498 2009 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 A0A1W2PQ09 198 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 GOLGA8MH3BSY2 632 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 HDAC3O15379 428 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 TSPAN1O60635 241 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 TSHBP01222 138 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 CALCAP01258 141 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 LGALS2P05162 132 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 LYNP07948 512 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 CFC1BP0CG36 223 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 CFC1P0CG37 223 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 ERVK-10P10266 1014 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 THRAP10827 490 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 UQCRBP14927 111 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 GCH1P30793 250 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 CHRNB4P30926 498 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 HOXC13P31276 330 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 ACSL1P33121 698 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 SLC1A6P48664 564 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 MRPL19P49406 292 aaKnown RBP4.35□□□□□ -1.71
SSR3-209ENST00000498205 DNAJB13P59910 316 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 ABCE1P61221 599 aaKnown RBP4.35□□□□□ -1.71
SSR3-209ENST00000498205 DYNLT1P63172 113 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 PPIDQ08752 370 aaKnown RBP4.35□□□□□ -1.71
SSR3-209ENST00000498205 PRKAA1Q13131 559 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 PRKG2Q13237 762 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 VGLL4Q14135 290 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 PCLAFQ15004 111 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 EFTUD2Q15029 972 aaKnown RBP eCLIP4.35□□□□□ -1.71
SSR3-209ENST00000498205 TAF13Q15543 124 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 CHI3L2Q15782 390 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 PSMD5Q16401 504 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 NTRK2Q16620 822 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 FASTKD1Q53R41 847 aaKnown RBP4.35□□□□□ -1.71
SSR3-209ENST00000498205 OGFRL1Q5TC84 451 aaPredicted RBP4.35□□□□□ -1.71
SSR3-209ENST00000498205 NCBP2-AS2Q69YL0 99 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 PDPK2PQ6A1A2 396 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 OR6B2Q6IFH4 312 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 PMF1Q6P1K2 205 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 NOTUMQ6P988 496 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 EPGNQ6UW88 154 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 HACD2Q6Y1H2 254 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 DENND5BQ6ZUT9 1274 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 PRPF39Q86UA1 669 aaKnown RBP4.35□□□□□ -1.71
SSR3-209ENST00000498205 CTAGE3PQ8IX95 158 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 FBXW8Q8N3Y1 598 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 TMEM190Q8WZ59 177 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 C18orf25Q96B23 403 aaPredicted RBP4.35□□□□□ -1.71
SSR3-209ENST00000498205 CCDC126Q96EE4 140 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 SLC47A1Q96FL8 570 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 CERS2Q96G23 380 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 SPATA33Q96N06 139 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 PANX3Q96QZ0 392 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 SORT1Q99523 831 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 TSC22D3Q99576 134 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 GPR22Q99680 433 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 RBBP8Q99708 897 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 ASCL2Q99929 193 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 ECSITQ9BQ95 431 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 SYT15Q9BQS2 421 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 CENPKQ9BS16 269 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 KIFC1Q9BW19 673 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 DRC3Q9H069 523 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 RHOJQ9H4E5 214 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 ZNF385DQ9H6B1 395 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 MINDY3Q9H8M7 445 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 S100A14Q9HCY8 104 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 FBXO6Q9NRD1 293 aaPredicted RBP4.35□□□□□ -1.71
SSR3-209ENST00000498205 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.35□□□□□ -1.71
SSR3-209ENST00000498205 BFARQ9NZS9 450 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 FLRT3Q9NZU0 649 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 PCSK1NQ9UHG2 260 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 EMCNQ9ULC0 261 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 RAB26Q9ULW5 256 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 PSMD13Q9UNM6 376 aa4.35□□□□□ -1.71
SSR3-209ENST00000498205 TRIP11Q15643 1979 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 SRCAPQ6ZRS2 3230 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 ARHGEF37A1IGU5 675 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms