RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 NEUROG2Q9H2A3 272 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SLCO5A1Q9H2Y9 848 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 EBF3Q9H4W6 596 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 RIOX1Q9H6W3 641 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 RPF1Q9H9Y2 349 aaKnown RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 IL23AQ9NPF7 189 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 KRCC1Q9NPI7 259 aaPredicted RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 NECTIN3Q9NQS3 549 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 NANSQ9NR45 359 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 MRPL22Q9NWU5 206 aaKnown RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SPHK1Q9NYA1 384 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 AHSPQ9NZD4 102 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 GCNT4Q9P109 453 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 UPB1Q9UBR1 384 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 PRSS50Q9UI38 385 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 BAIAP2Q9UQB8 552 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 MRPS18BQ9Y676 258 aaKnown RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SAR1BQ9Y6B6 198 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 CDY2AQ9Y6F7 541 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 RGS12O14924 1447 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 EMSYQ7Z589 1322 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF541Q9H0D2 1346 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 A0A0A6YYC8 382 aaPredicted RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 TRAV25A0A0B4J276 109 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 FABP12A6NFH5 140 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 KLRC4-KLRK1H3BQV0 150 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 I3L1I5 382 aaPredicted RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 WWP2O00308 870 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 KPNA3O00505 521 aaPredicted RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 ADAM12O43184 909 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 GRID2O43424 1007 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 PLIN3O60664 434 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SDC3O75056 442 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 GLRA3O75311 464 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 VPS26AO75436 327 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 EIF3GO75821 320 aaKnown RBP eCLIP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 PAK4O96013 591 aaPredicted RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 PIGRP01833 764 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 C1SP09871 688 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC35E2BP0CK96 405 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC35E2P0CK97 266 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 ITGAMP11215 1152 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC2A4P14672 509 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 NELFEP18615 380 aaKnown RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 COMTP21964 271 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 PROZP22891 400 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 GLRA1P23415 457 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 PRKCHP24723 683 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SSTR2P30874 369 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 FMO5P49326 533 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 COMPP49747 757 aaPredicted RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 NDUFV1P49821 464 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 GMPSP49915 693 aaPredicted RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 CCR6P51684 374 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 FGF8P55075 233 aaPredicted RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 MFAP4P55083 255 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 MAZP56270 477 aaKnown RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 ERVS71-1P61550 626 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 YWHAGP61981 247 aaKnown RBP eCLIP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 ADAM8P78325 824 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 VLDLRP98155 873 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 CKAP4Q07065 602 aaKnown RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 EFEMP1Q12805 493 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SPP2Q13103 211 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 ITGADQ13349 1161 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 ORC2Q13416 577 aaPredicted RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 PCLAFQ15004 111 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 TRAM1Q15629 374 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 DLG2Q15700 870 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 MPPED2Q15777 294 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 GPR33Q49SQ1 333 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 PCID2Q5JVF3 399 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF618Q5T7W0 954 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 LCE5AQ5TCM9 118 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 NKAIN2Q5VXU1 208 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 ACSM5Q6NUN0 579 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 GDPD4Q6W3E5 623 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 ADGRG3Q86Y34 549 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 GPALPP1Q8IXQ4 340 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 FSTL5Q8N475 847 aaPredicted RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 VGLL2Q8N8G2 317 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 CAMKVQ8NCB2 501 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 OR2I1PQ8NGU4 316 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SUN3Q8TAQ9 357 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SPPL2AQ8TCT8 520 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SNAPC3Q92966 411 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 CAVIN3Q969G5 261 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 EID2BQ96D98 161 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SH3YL1Q96HL8 342 aaPredicted RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 WDFY2Q96P53 400 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 HBEGFQ99075 208 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 FAM110AQ9BQ89 295 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 FUZQ9BT04 418 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 ALKBH7Q9BT30 221 aaPredicted RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 RAB1BQ9H0U4 201 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 CSTL1Q9H114 145 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 CCDC134Q9H6E4 229 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF430Q9H8G1 570 aaPredicted RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 CSNK1G1Q9HCP0 422 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms