RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 GPR45Q9Y5Y3 372 aa17.99■□□□□ 0.47
HDAC4-212ENST00000495497 SUV39H1O43463 412 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 OR6B1O95007 311 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 TGDSO95455 350 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 NADKO95544 446 aaPredicted RBP17.98■□□□□ 0.47
HDAC4-212ENST00000495497 GPX3P22352 226 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 TRHRP34981 398 aaPredicted RBP17.98■□□□□ 0.47
HDAC4-212ENST00000495497 GPC1P35052 558 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 MDH1P40925 334 aaKnown RBP17.98■□□□□ 0.47
HDAC4-212ENST00000495497 SOX3P41225 446 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 EMDP50402 254 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 HLCSP50747 726 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 CDK9P50750 372 aaKnown RBP17.98■□□□□ 0.47
HDAC4-212ENST00000495497 NR0B1P51843 470 aaKnown RBP17.98■□□□□ 0.47
HDAC4-212ENST00000495497 C21orf58P58505 322 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 ZNF169Q14929 603 aaPredicted RBP17.98■□□□□ 0.47
HDAC4-212ENST00000495497 TLR1Q15399 786 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 NNATQ16517 81 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 HLA-DQA1Q5Y7H0 255 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 OR4F3Q6IEY1 312 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 IL20RBQ6UXL0 311 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 TMEM64Q6YI46 380 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 ACAD11Q709F0 780 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 ZNF227Q86WZ6 799 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 ZNF441Q8N8Z8 693 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 MDS2Q8NDY4 140 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 ADIPOR1Q96A54 375 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 ELP4Q96EB1 424 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 ZBED6CLQ96FA7 236 aaPredicted RBP17.98■□□□□ 0.47
HDAC4-212ENST00000495497 PRPF18Q99633 342 aaKnown RBP17.98■□□□□ 0.47
HDAC4-212ENST00000495497 DUSP26Q9BV47 211 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 NPHS2Q9NP85 383 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 TCF7L2Q9NQB0 619 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 LRFN1Q9P244 771 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 ANAPC2Q9UJX6 822 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 CPAMD8Q8IZJ3 1885 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 KALRNO60229 2985 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 CROCCQ5TZA2 2017 aa17.98■□□□□ 0.47
HDAC4-212ENST00000495497 TLN1Q9Y490 2541 aaKnown RBP17.97■□□□□ 0.47
HDAC4-212ENST00000495497 A0A1W2PRB8 838 aa17.97■□□□□ 0.47
HDAC4-212ENST00000495497 E9PBE3 544 aa17.97■□□□□ 0.47
HDAC4-212ENST00000495497 UPK1AO00322 258 aa17.97■□□□□ 0.47
HDAC4-212ENST00000495497 UBDO15205 165 aa17.97■□□□□ 0.47
HDAC4-212ENST00000495497 POLR3GO15318 223 aaPredicted RBP17.97■□□□□ 0.47
HDAC4-212ENST00000495497 PLOD3O60568 738 aa17.97■□□□□ 0.47
HDAC4-212ENST00000495497 PRAMEF2O60811 474 aa17.97■□□□□ 0.47
HDAC4-212ENST00000495497 NEURL1O76050 574 aa17.97■□□□□ 0.47
HDAC4-212ENST00000495497 SORBS2O94875 1100 aaKnown RBP17.97■□□□□ 0.47
HDAC4-212ENST00000495497 IL12AP29459 219 aa17.97■□□□□ 0.47
HDAC4-212ENST00000495497 CASRP41180 1078 aa17.97■□□□□ 0.47
HDAC4-212ENST00000495497 CYB561P49447 251 aa17.97■□□□□ 0.47
HDAC4-212ENST00000495497 MLLT10P55197 1068 aa17.97■□□□□ 0.47
HDAC4-212ENST00000495497 SF3A3Q12874 501 aaKnown RBP eCLIP17.97■□□□□ 0.47
HDAC4-212ENST00000495497 PRR30Q53SZ7 412 aaPredicted RBP17.97■□□□□ 0.47
HDAC4-212ENST00000495497 PRICKLE2Q7Z3G6 844 aa17.97■□□□□ 0.47
HDAC4-212ENST00000495497 ZFP28Q8NHY6 868 aa17.97■□□□□ 0.47
HDAC4-212ENST00000495497 ASB15Q8WXK1 588 aa17.97■□□□□ 0.47
HDAC4-212ENST00000495497 BHLHE41Q9C0J9 482 aaPredicted RBP17.97■□□□□ 0.47
HDAC4-212ENST00000495497 KLHL1Q9NR64 748 aa17.97■□□□□ 0.47
HDAC4-212ENST00000495497 ACSS1Q9NUB1 689 aaPredicted RBP17.97■□□□□ 0.47
HDAC4-212ENST00000495497 ATAD3AQ9NVI7 634 aa17.97■□□□□ 0.47
HDAC4-212ENST00000495497 FGFR1OP2Q9NVK5 253 aa17.97■□□□□ 0.47
HDAC4-212ENST00000495497 DCTN4Q9UJW0 460 aa17.97■□□□□ 0.47
HDAC4-212ENST00000495497 TRAV17A0A0B4J275 112 aa17.96■□□□□ 0.47
HDAC4-212ENST00000495497 A8MVJ9 347 aa17.96■□□□□ 0.47
HDAC4-212ENST00000495497 PLOD2O00469 737 aa17.96■□□□□ 0.47
HDAC4-212ENST00000495497 BCAS2O75934 225 aaPredicted RBP17.96■□□□□ 0.47
HDAC4-212ENST00000495497 C6orf47O95873 294 aa17.96■□□□□ 0.47
HDAC4-212ENST00000495497 VIMP08670 466 aaKnown RBP17.96■□□□□ 0.47
HDAC4-212ENST00000495497 DDX5P17844 614 aaKnown RBP17.96■□□□□ 0.47
HDAC4-212ENST00000495497 C19orf57Q0VDD7 668 aa17.96■□□□□ 0.47
HDAC4-212ENST00000495497 RPS6KA2Q15349 733 aa17.96■□□□□ 0.47
HDAC4-212ENST00000495497 ZNF766Q5HY98 468 aa17.96■□□□□ 0.47
HDAC4-212ENST00000495497 LYPD8Q6UX82 237 aa17.96■□□□□ 0.47
HDAC4-212ENST00000495497 MDGA2Q7Z553 956 aa17.96■□□□□ 0.47
HDAC4-212ENST00000495497 PRR22Q8IZ63 422 aa17.96■□□□□ 0.47
HDAC4-212ENST00000495497 CYP4Z2PQ8N1L4 340 aa17.96■□□□□ 0.47
HDAC4-212ENST00000495497 ERP27Q96DN0 273 aa17.96■□□□□ 0.47
HDAC4-212ENST00000495497 NXF5Q9H1B4 397 aaKnown RBP17.96■□□□□ 0.47
HDAC4-212ENST00000495497 EPN3Q9H201 632 aa17.96■□□□□ 0.47
HDAC4-212ENST00000495497 CLMPQ9H6B4 373 aa17.96■□□□□ 0.47
HDAC4-212ENST00000495497 TRIM45Q9H8W5 580 aaPredicted RBP17.96■□□□□ 0.47
HDAC4-212ENST00000495497 FOLH1BQ9HBA9 442 aa17.96■□□□□ 0.47
HDAC4-212ENST00000495497 DDX18Q9NVP1 670 aaKnown RBP17.96■□□□□ 0.47
HDAC4-212ENST00000495497 HPF1Q9NWY4 346 aa17.96■□□□□ 0.47
HDAC4-212ENST00000495497 C19orf53Q9UNZ5 99 aaPredicted RBP17.96■□□□□ 0.47
HDAC4-212ENST00000495497 PCDHGA10Q9Y5H3 936 aa17.96■□□□□ 0.47
HDAC4-212ENST00000495497 A0A087WV62 115 aa17.95■□□□□ 0.46
HDAC4-212ENST00000495497 TTLL8A6PVC2 850 aa17.95■□□□□ 0.46
HDAC4-212ENST00000495497 IDO1P14902 403 aa17.95■□□□□ 0.46
HDAC4-212ENST00000495497 WNT3P56703 355 aa17.95■□□□□ 0.46
HDAC4-212ENST00000495497 PHC1P78364 1004 aa17.95■□□□□ 0.46
HDAC4-212ENST00000495497 SRSF11Q05519 484 aaKnown RBP17.95■□□□□ 0.46
HDAC4-212ENST00000495497 PDCD4Q53EL6 469 aaKnown RBP17.95■□□□□ 0.46
HDAC4-212ENST00000495497 SPANXN4Q5MJ08 99 aa17.95■□□□□ 0.46
HDAC4-212ENST00000495497 CGB2Q6NT52 195 aa17.95■□□□□ 0.46
HDAC4-212ENST00000495497 WDR53Q7Z5U6 358 aaPredicted RBP17.95■□□□□ 0.46
HDAC4-212ENST00000495497 CAMKMTQ7Z624 323 aa17.95■□□□□ 0.46
HDAC4-212ENST00000495497 CLECL1Q8IZS7 167 aa17.95■□□□□ 0.46
HDAC4-212ENST00000495497 OR2L13Q8N349 312 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms