RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 ECI2O75521 394 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 OAZ2O95190 189 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 GPIP06744 558 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 GSTA1P08263 222 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 SLC2A2P11168 524 aaPredicted RBP3.9□□□□□ -1.79
GTF3A-208ENST00000493903 UQCRBP14927 111 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 RPL35AP18077 110 aaKnown RBP3.9□□□□□ -1.79
GTF3A-208ENST00000493903 MAT2AP31153 395 aaKnown RBP3.9□□□□□ -1.79
GTF3A-208ENST00000493903 CEACAM8P31997 349 aaPredicted RBP3.9□□□□□ -1.79
GTF3A-208ENST00000493903 ATP5OP48047 213 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 SGSHP51688 502 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 BACE1P56817 501 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 CDR2Q01850 454 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 HYAL1Q12794 435 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 P2RY6Q15077 328 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 SPANXN4Q5MJ08 99 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 CAPRIN2Q6IMN6 1127 aaKnown RBP3.9□□□□□ -1.79
GTF3A-208ENST00000493903 C11orf87Q6NUJ2 197 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 Q6ZVQ6 151 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 RUFY3Q7L099 469 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 NANOGNBQ7Z5D8 188 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 GPR142Q7Z601 462 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 NFE4Q86UQ8 179 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 WDR49Q8IV35 697 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 ZNF683Q8IZ20 524 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 BBS5Q8N3I7 341 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 GVQW1Q8N7I0 195 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 NIPA2Q8N8Q9 360 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 ANKFN1Q8N957 763 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 NFAM1Q8NET5 270 aaPredicted RBP3.9□□□□□ -1.79
GTF3A-208ENST00000493903 SECTM1Q8WVN6 248 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 HPSE2Q8WWQ2 592 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 FCAMRQ8WWV6 532 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 DYRK2Q92630 601 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 PNPLA2Q96AD5 504 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 IL17FQ96PD4 163 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 DUX5Q96PT3 197 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 OMDQ99983 421 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 SLC39A3Q9BRY0 314 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 PAPOLGQ9BWT3 736 aaKnown RBP3.9□□□□□ -1.79
GTF3A-208ENST00000493903 EVA1AQ9H8M9 152 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 INTS9Q9NV88 658 aaKnown RBP3.9□□□□□ -1.79
GTF3A-208ENST00000493903 AIPL1Q9NZN9 384 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 TUBGCP4Q9UGJ1 667 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 SLC6A5Q9Y345 797 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 RNF115Q9Y4L5 304 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 AP4B1Q9Y6B7 739 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 CCDC7Q96M83 1385 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 SAMD9LQ8IVG5 1584 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 VWDEQ8N2E2 1590 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 PPIAL4CA0A0B4J2A2 164 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 CD8B2A6NJW9 211 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 ALOX15BO15296 676 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 CFLARO15519 480 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 ERLIN1O75477 346 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 RHBDL1O75783 438 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 CIB2O75838 187 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 SEC24AO95486 1093 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 ANGPTL1O95841 491 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 LYNP07948 512 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 ACAA1P09110 424 aaPredicted RBP3.89□□□□□ -1.79
GTF3A-208ENST00000493903 PPIAL4GP0DN37 164 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 CYP11B1P15538 503 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 HNF1AP20823 631 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 GIFP27352 417 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 RPS4XP62701 263 aaKnown RBP3.89□□□□□ -1.79
GTF3A-208ENST00000493903 LTBQ06643 244 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 NCBP1Q09161 790 aaKnown RBP3.89□□□□□ -1.79
GTF3A-208ENST00000493903 RIGQ13278 110 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 P2RY14Q15391 338 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 CDKN3Q16667 212 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 ZNF699Q32M78 642 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 LINC01620Q4KN68 170 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 RFTN2Q52LD8 501 aaPredicted RBP3.89□□□□□ -1.79
GTF3A-208ENST00000493903 ZNF549Q6P9A3 640 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 SYCE2Q6PIF2 218 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 SLC25A47Q6Q0C1 308 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 NET1Q7Z628 596 aaPredicted RBP3.89□□□□□ -1.79
GTF3A-208ENST00000493903 SLC22A9Q8IVM8 553 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 EFCAB13Q8IY85 973 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 DND1Q8IYX4 353 aaKnown RBP3.89□□□□□ -1.79
GTF3A-208ENST00000493903 LINC00518Q8N0U6 118 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 NAGSQ8N159 534 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 OR4C3Q8NH37 302 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 CAPNS2Q96L46 248 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 UHRF2Q96PU4 802 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 GSDMCQ9BYG8 508 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 CXXC4Q9H2H0 198 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 DCTPP1Q9H773 170 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 UBE2TQ9NPD8 197 aaPredicted RBP3.89□□□□□ -1.79
GTF3A-208ENST00000493903 CRLS1Q9UJA2 301 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 FZR1Q9UM11 496 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 FAF1Q9UNN5 650 aaPredicted RBP3.89□□□□□ -1.79
GTF3A-208ENST00000493903 NIP7Q9Y221 180 aaKnown RBP eCLIP3.89□□□□□ -1.79
GTF3A-208ENST00000493903 CLTCQ00610 1675 aaKnown RBP3.89□□□□□ -1.79
GTF3A-208ENST00000493903 CPS1P31327 1500 aa3.89□□□□□ -1.79
GTF3A-208ENST00000493903 INO80Q9ULG1 1556 aaPredicted RBP3.89□□□□□ -1.79
GTF3A-208ENST00000493903 DNMT1P26358 1616 aaKnown RBP3.88□□□□□ -1.79
GTF3A-208ENST00000493903 EEA1Q15075 1411 aa3.88□□□□□ -1.79
GTF3A-208ENST00000493903 ARHGAP35Q9NRY4 1499 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms