RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 NPPAP01160 153 aa18.05■□□□□ 0.48
USP39-218ENST00000493829 SOX11P35716 441 aa18.05■□□□□ 0.48
USP39-218ENST00000493829 ZNF155Q12901 538 aaPredicted RBP18.05■□□□□ 0.48
USP39-218ENST00000493829 LASP1Q14847 261 aaKnown RBP18.05■□□□□ 0.48
USP39-218ENST00000493829 PCOLCEQ15113 449 aa18.05■□□□□ 0.48
USP39-218ENST00000493829 LACTB2Q53H82 288 aaPredicted RBP18.05■□□□□ 0.48
USP39-218ENST00000493829 COX20Q5RI15 118 aa18.05■□□□□ 0.48
USP39-218ENST00000493829 ATP1A1-AS1Q5TC04 95 aa18.05■□□□□ 0.48
USP39-218ENST00000493829 SAXO2Q658L1 398 aa18.05■□□□□ 0.48
USP39-218ENST00000493829 KIRREL2Q6UWL6 708 aa18.05■□□□□ 0.48
USP39-218ENST00000493829 C6orf120Q7Z4R8 191 aa18.05■□□□□ 0.48
USP39-218ENST00000493829 C10orf111Q8N326 155 aa18.05■□□□□ 0.48
USP39-218ENST00000493829 RNF148Q8N7C7 305 aa18.05■□□□□ 0.48
USP39-218ENST00000493829 DAZLQ92904 295 aaKnown RBP18.05■□□□□ 0.48
USP39-218ENST00000493829 C16orf58Q96GQ5 468 aa18.05■□□□□ 0.48
USP39-218ENST00000493829 FBXL20Q96IG2 436 aa18.05■□□□□ 0.48
USP39-218ENST00000493829 MS4A4EQ96PG1 132 aa18.05■□□□□ 0.48
USP39-218ENST00000493829 BTBD10Q9BSF8 475 aa18.05■□□□□ 0.48
USP39-218ENST00000493829 NDE1Q9NXR1 346 aa18.05■□□□□ 0.48
USP39-218ENST00000493829 GMPR2Q9P2T1 348 aaKnown RBP18.05■□□□□ 0.48
USP39-218ENST00000493829 C19orf53Q9UNZ5 99 aaPredicted RBP18.05■□□□□ 0.48
USP39-218ENST00000493829 L3MBTL1Q9Y468 752 aa18.05■□□□□ 0.48
USP39-218ENST00000493829 PCDHGA6Q9Y5G7 932 aa18.05■□□□□ 0.48
USP39-218ENST00000493829 IGHV1-45A0A0A0MS14 117 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 PLOD3O60568 738 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 CREG1O75629 220 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 SLITRK5O94991 958 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 IGHEP01854 428 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 CLPSP04118 112 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 HMGN2P05204 90 aaKnown RBP18.04■□□□□ 0.48
USP39-218ENST00000493829 COX6A1P12074 109 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 S1PR1P21453 382 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 GALNSP34059 522 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 CRATP43155 626 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 RASSF2P50749 326 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 SSPNQ14714 243 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 TNFAIP8L2Q6P589 184 aaPredicted RBP18.04■□□□□ 0.48
USP39-218ENST00000493829 BNC2Q6ZN30 1099 aaPredicted RBP18.04■□□□□ 0.48
USP39-218ENST00000493829 MRGPREQ86SM8 312 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 OR11G2Q8NGC1 345 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 NCLNQ969V3 563 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 TMEM125Q96AQ2 219 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 NEURL3Q96EH8 262 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 NUDT9Q9BW91 350 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 SERHL2Q9H4I8 314 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 EPS8L2Q9H6S3 715 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 SPAG4Q9NPE6 437 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 CMTM6Q9NX76 183 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 ZNF639Q9UID6 485 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 DTX4Q9Y2E6 619 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.04■□□□□ 0.48
USP39-218ENST00000493829 ASPMQ8IZT6 3477 aa18.04■□□□□ 0.48
USP39-218ENST00000493829 A0A087WV62 115 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 LOC102723996A0A087X1L8 192 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 SYNDIG1LA6NDD5 238 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 NME4O00746 187 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 ATP1A4Q13733 1029 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 RNF111Q6ZNA4 994 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 OR5D16Q8NGK9 328 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 ZNF721Q8TF20 911 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 KCNE4Q8WWG9 221 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 FGF11Q92914 225 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 MOAP1Q96BY2 351 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 CLPTM1LQ96KA5 538 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 CDRT15Q96T59 188 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 HOPXQ9BPY8 73 aaPredicted RBP18.03■□□□□ 0.48
USP39-218ENST00000493829 OR10A5Q9H207 317 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 LRMDAQ9H2I8 198 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 ZNF160Q9HCG1 818 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 GPATCH2Q9NW75 528 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 COPS7AQ9UBW8 275 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 FBXL4Q9UKA2 621 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 C15orf38-AP3S2A0A0A6YYH1 394 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 EVPLLA8MZ36 301 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 PRKNO60260 465 aaPredicted RBP18.03■□□□□ 0.48
USP39-218ENST00000493829 PRAMEF2O60811 474 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 COQ9O75208 318 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 PDE5AO76074 875 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 KRT75O95678 551 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 CELA2AP08217 269 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 ETFAP13804 333 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 FUT7Q11130 342 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 NNATQ16517 81 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 DNAL1Q4LDG9 190 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 BHLHB9Q6PI77 547 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 ARPINQ7Z6K5 226 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 YTHDF3Q7Z739 585 aaKnown RBP18.03■□□□□ 0.48
USP39-218ENST00000493829 IFNEQ86WN2 208 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 RAB43Q86YS6 212 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 SLC15A3Q8IY34 581 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 C7orf57Q8NEG2 295 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 B3GNT7Q8NFL0 401 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 OR8J3Q8NGG0 315 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 GIMAP5Q96F15 307 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 GAL3ST4Q96RP7 486 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 THTPAQ9BU02 230 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 ZNF700Q9H0M5 742 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 C1orf21Q9H246 121 aa18.03■□□□□ 0.48
USP39-218ENST00000493829 USP22Q9UPT9 525 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms