RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 PRODH2Q9UF12 536 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 ZNF639Q9UID6 485 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 SNX8Q9Y5X2 465 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 GMEB1Q9Y692 573 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 LAMA5O15230 3695 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 PTPRBP23467 1997 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 A0A1W2PS29 197 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 A8MUA0 341 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 IGKV3-11P04433 115 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 ABCB1P08183 1280 aaPredicted RBP11.58□□□□□ -0.56
SNX17-208ENST00000493711 COX6A1P12074 109 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 SOAT1P35610 550 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 CHI3L1P36222 383 aaPredicted RBP11.58□□□□□ -0.56
SNX17-208ENST00000493711 MC3RP41968 323 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 PRIM2P49643 509 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 RASSF2P50749 326 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 EFNA3P52797 238 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 SLC26A5P58743 744 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 DCAF7P61962 342 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 EEF1A2Q05639 463 aaKnown RBP11.58□□□□□ -0.56
SNX17-208ENST00000493711 DUSP2Q05923 314 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 VAC14Q08AM6 782 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 TP53BP2Q13625 1128 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 IL10RAQ13651 578 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 FHL5Q5TD97 284 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 REP15Q6BDI9 236 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 JMJD6Q6NYC1 403 aaPredicted RBP11.58□□□□□ -0.56
SNX17-208ENST00000493711 FAM180BQ6P0A1 224 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 SLC2A7Q6PXP3 512 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 TMEM107Q6UX40 140 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 RNF111Q6ZNA4 994 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 DHDDSQ86SQ9 333 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 POU5F2Q8N7G0 328 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 TMEM102Q8N9M5 508 aaPredicted RBP11.58□□□□□ -0.56
SNX17-208ENST00000493711 NFAM1Q8NET5 270 aaPredicted RBP11.58□□□□□ -0.56
SNX17-208ENST00000493711 ADCY4Q8NFM4 1077 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 OR5L2Q8NGL0 311 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 C8orf44Q96CB5 159 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 NAF1Q96HR8 494 aaKnown RBP11.58□□□□□ -0.56
SNX17-208ENST00000493711 IMMP1LQ96LU5 166 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 MS4A4EQ96PG1 132 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 HOPXQ9BPY8 73 aaPredicted RBP11.58□□□□□ -0.56
SNX17-208ENST00000493711 WDR77Q9BQA1 342 aaPredicted RBP11.58□□□□□ -0.56
SNX17-208ENST00000493711 SEMA4CQ9C0C4 833 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 OR8D2Q9GZM6 311 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 CXorf36Q9H7Y0 433 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 MMP25Q9NPA2 562 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 ZCCHC3Q9NUD5 404 aaKnown RBP11.58□□□□□ -0.56
SNX17-208ENST00000493711 ARL8BQ9NVJ2 186 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 THUMPD1Q9NXG2 353 aaKnown RBP11.58□□□□□ -0.56
SNX17-208ENST00000493711 FBXL4Q9UKA2 621 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 POLHQ9Y253 713 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 PCDHGB3Q9Y5G1 929 aa11.58□□□□□ -0.56
SNX17-208ENST00000493711 MYOCOSA0A1B0GUC4 107 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 CDC14CA4D256 554 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 ASPDHA6ND91 283 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 DUXAA6NLW8 204 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 EVPLLA8MZ36 301 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 UPK1AO00322 258 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 FBP2O00757 339 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 AIM2O14862 343 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 SEC24DO94855 1032 aaPredicted RBP11.57□□□□□ -0.56
SNX17-208ENST00000493711 DDAH2O95865 285 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 AGR2O95994 175 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 CAPNS1P04632 268 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 SERPINA7P05543 415 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 EFNA1P20827 205 aaPredicted RBP11.57□□□□□ -0.56
SNX17-208ENST00000493711 S1PR1P21453 382 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 CDK9P50750 372 aaKnown RBP11.57□□□□□ -0.56
SNX17-208ENST00000493711 CLCN2P51788 898 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 FOXL2P58012 376 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 CDC20Q12834 499 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 AIMP2Q13155 320 aaKnown RBP11.57□□□□□ -0.56
SNX17-208ENST00000493711 ATP1A4Q13733 1029 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 ZNHIT3Q15649 155 aaPredicted RBP11.57□□□□□ -0.56
SNX17-208ENST00000493711 LTB4RQ15722 352 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 BTBD16Q32M84 506 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 TRMT12Q53H54 448 aaKnown RBP11.57□□□□□ -0.56
SNX17-208ENST00000493711 PAGE3Q5JUK9 113 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 IRAK1BP1Q5VVH5 260 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 FAM111BQ6SJ93 734 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 C6orf89Q6UWU4 347 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 HSDL2Q6YN16 418 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 CCDC81Q6ZN84 652 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 SLC29A4Q7RTT9 530 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 RETREG3Q86VR2 466 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 KBTBD2Q8IY47 623 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 CLEC1AQ8NC01 280 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 NUP43Q8NFH3 380 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 OR7G2Q8NG99 324 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 KAT2AQ92830 837 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 RCN3Q96D15 328 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 NEURL3Q96EH8 262 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 FAM120BQ96EK7 910 aaKnown RBP11.57□□□□□ -0.56
SNX17-208ENST00000493711 CGREF1Q99674 301 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 SLC35A5Q9BS91 424 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 INPP5KQ9BT40 448 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 PAIP1Q9H074 479 aaKnown RBP11.57□□□□□ -0.56
SNX17-208ENST00000493711 OR10A5Q9H207 317 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 ATP13A2Q9NQ11 1180 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms