RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 SLC9A8Q9Y2E8 581 aa9.45□□□□□ -0.9
PRPF3-206ENST00000493553 TPRKBQ9Y3C4 175 aa9.45□□□□□ -0.9
PRPF3-206ENST00000493553 SLC22A7Q9Y694 548 aa9.45□□□□□ -0.9
PRPF3-206ENST00000493553 ENPP4Q9Y6X5 453 aa9.45□□□□□ -0.9
PRPF3-206ENST00000493553 COL4A2P08572 1712 aa9.45□□□□□ -0.9
PRPF3-206ENST00000493553 LOC100130705A0A1B0GUX0 176 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 FAM221AA4D161 298 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 LILRA5A6NI73 299 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 H0Y8X5 98 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 TNFRSF11BO00300 401 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 BTN3A3O00478 584 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 BCKDKO14874 412 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 CASC3O15234 703 aaKnown RBP9.44□□□□□ -0.9
PRPF3-206ENST00000493553 PROM1O43490 865 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 SRPX2O60687 465 aaPredicted RBP9.44□□□□□ -0.9
PRPF3-206ENST00000493553 NOL3O60936 208 aaKnown RBP9.44□□□□□ -0.9
PRPF3-206ENST00000493553 OXSR1O95747 527 aaPredicted RBP9.44□□□□□ -0.9
PRPF3-206ENST00000493553 TFPTP0C1Z6 253 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 ATP6V1B1P15313 513 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 ALOX12P18054 663 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 PEBP1P30086 187 aaKnown RBP9.44□□□□□ -0.9
PRPF3-206ENST00000493553 ALDH3B2P48448 385 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 HMGA2P52926 109 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 BTN3A2P78410 334 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 KCNAB2Q13303 367 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 BIKQ13323 160 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 GPR18Q14330 331 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 FZD2Q14332 565 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 TCEA2Q15560 299 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 ZBED5Q49AG3 693 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 BROXQ5VW32 411 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 ZNF773Q6PK81 442 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 GPR141Q7Z602 305 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 C10orf111Q8N326 155 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 LRRC25Q8N386 305 aaPredicted RBP9.44□□□□□ -0.9
PRPF3-206ENST00000493553 OR4K14Q8NGD5 310 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 OR8K5Q8NH50 307 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 BAHD1Q8TBE0 780 aaPredicted RBP9.44□□□□□ -0.9
PRPF3-206ENST00000493553 ZNF566Q969W8 418 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 OR2A5Q96R48 311 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 ZNF300Q96RE9 604 aaPredicted RBP9.44□□□□□ -0.9
PRPF3-206ENST00000493553 KRTAP4-12Q9BQ66 201 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 SORBS1Q9BX66 1292 aaKnown RBP9.44□□□□□ -0.9
PRPF3-206ENST00000493553 LTB4R2Q9NPC1 389 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 KRT84Q9NSB2 600 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 ZCCHC3Q9NUD5 404 aaKnown RBP9.44□□□□□ -0.9
PRPF3-206ENST00000493553 PTTG2Q9NZH5 202 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 NDUFAF4Q9P032 175 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 PDP1Q9P0J1 537 aaPredicted RBP9.44□□□□□ -0.9
PRPF3-206ENST00000493553 NTMQ9P121 344 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 PTGFRNQ9P2B2 879 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 FBXL21Q9UKT6 434 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 RAB23Q9ULC3 237 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 POFUT2Q9Y2G5 429 aa9.44□□□□□ -0.9
PRPF3-206ENST00000493553 IGHV1OR15-9A0A0B4J2B8 117 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 A0A1W2PR48 441 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 EIF4E1BA6NMX2 242 aaKnown RBP9.43□□□□□ -0.9
PRPF3-206ENST00000493553 NARSO43776 548 aaKnown RBP9.43□□□□□ -0.9
PRPF3-206ENST00000493553 AHCYL1O43865 530 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 MPZL2O60487 215 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 PGM3O95394 542 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 AIFM1O95831 613 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 PF4P02776 101 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 CSF2P04141 144 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 RNASE1P07998 156 aaKnown RBP9.43□□□□□ -0.9
PRPF3-206ENST00000493553 NR2F1P10589 423 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 NME1P15531 152 aaKnown RBP9.43□□□□□ -0.9
PRPF3-206ENST00000493553 EFNA1P20827 205 aaPredicted RBP9.43□□□□□ -0.9
PRPF3-206ENST00000493553 CPN2P22792 545 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 CD38P28907 300 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 PXNP49023 591 aaPredicted RBP9.43□□□□□ -0.9
PRPF3-206ENST00000493553 HNRNPKP61978 463 aaKnown RBP eCLIP9.43□□□□□ -0.9
PRPF3-206ENST00000493553 HPCAP84074 193 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 VLDLRP98155 873 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 TNFRSF17Q02223 184 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 HHEXQ03014 270 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 HSPB3Q12988 150 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 EIF2B5Q13144 721 aaKnown RBP9.43□□□□□ -0.9
PRPF3-206ENST00000493553 NDUFA9Q16795 377 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 RNF220Q5VTB9 566 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 ZCCHC12Q6PEW1 402 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 TBPL2Q6SJ96 375 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 B3GNT6Q6ZMB0 384 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 ZNF793Q6ZN11 406 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 RNF44Q7L0R7 432 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 VN1R4Q7Z5H5 301 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 VTCN1Q7Z7D3 282 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 PLD3Q8IV08 490 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 MCATQ8IVS2 390 aaKnown RBP9.43□□□□□ -0.9
PRPF3-206ENST00000493553 UBALD2Q8IYN6 164 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 LGI4Q8N135 537 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 PARP8Q8N3A8 854 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 MFSD4AQ8N468 514 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 FAM46DQ8NEK8 389 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 ZNF420Q8TAQ5 688 aaPredicted RBP9.43□□□□□ -0.9
PRPF3-206ENST00000493553 SUN3Q8TAQ9 357 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 FAM110BQ8TC76 370 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 UTP15Q8TED0 518 aaKnown RBP9.43□□□□□ -0.9
PRPF3-206ENST00000493553 PHF10Q8WUB8 498 aaKnown RBP9.43□□□□□ -0.9
PRPF3-206ENST00000493553 SLC38A5Q8WUX1 472 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms