RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 MTERF3Q96E29 417 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 SCMH1Q96GD3 660 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 ZNF764Q96H86 408 aaPredicted RBP11.83□□□□□ -0.52
CLIP2-209ENST00000493166 AMDHD1Q96NU7 426 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 AGPAT4Q9NRZ5 378 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 ASF1BQ9NVP2 202 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 PRODH2Q9UF12 536 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 NINQ8N4C6 2090 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 SDHDO14521 159 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 NME2P1O60361 137 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 ZNF354AO60765 605 aaPredicted RBP11.82□□□□□ -0.52
CLIP2-209ENST00000493166 BCAS2O75934 225 aaPredicted RBP11.82□□□□□ -0.52
CLIP2-209ENST00000493166 SLITRK5O94991 958 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 G6PDP11413 515 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 LBPP18428 481 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 PRPS1L1P21108 318 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 GPX3P22352 226 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 NME2P22392 152 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 GPC1P35052 558 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 NR0B1P51843 470 aaKnown RBP11.82□□□□□ -0.52
CLIP2-209ENST00000493166 FOXK1P85037 733 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 HSPB3Q12988 150 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 DUSP8Q13202 625 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 IGFBP7Q16270 282 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 ZNF385BQ569K4 471 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 TMEM107Q6UX40 140 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 GALNTL5Q7Z4T8 443 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 ATCAYQ86WG3 371 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 ZNF227Q86WZ6 799 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 ZGRF1Q86YA3 2104 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 WDR75Q8IWA0 830 aaKnown RBP11.82□□□□□ -0.52
CLIP2-209ENST00000493166 LRRC34Q8IZ02 419 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 TAGAPQ8N103 731 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 BCORP1Q8N888 145 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 SIMC1Q8NDZ2 872 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 ZFP28Q8NHY6 868 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 PIWIL2Q8TC59 973 aaKnown RBP11.82□□□□□ -0.52
CLIP2-209ENST00000493166 GRHL3Q8TE85 626 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 TP53INP1Q96A56 240 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 GLIPR2Q9H4G4 154 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 ANKRA2Q9H9E1 313 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 TIMMDC1Q9NPL8 285 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 RYDENQ9NUL5 291 aaKnown RBP11.82□□□□□ -0.52
CLIP2-209ENST00000493166 ASIC5Q9NY37 505 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 ATP6V1HQ9UI12 483 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 NTNG1Q9Y2I2 539 aa11.82□□□□□ -0.52
CLIP2-209ENST00000493166 KLF13Q9Y2Y9 288 aaPredicted RBP11.82□□□□□ -0.52
CLIP2-209ENST00000493166 PLOD3O60568 738 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 COQ9O75208 318 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 NADKO95544 446 aaPredicted RBP11.81□□□□□ -0.52
CLIP2-209ENST00000493166 SOX18P35713 384 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 MC3RP41968 323 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 EMDP50402 254 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 NRG3P56975 720 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 PMP22Q01453 160 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 NNATQ16517 81 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 HSP90B2PQ58FF3 399 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 CPTPQ5TA50 214 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 RTL4Q6ZR62 310 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 LARP4Q71RC2 724 aaKnown RBP eCLIP11.81□□□□□ -0.52
CLIP2-209ENST00000493166 ZNF551Q7Z340 670 aaPredicted RBP11.81□□□□□ -0.52
CLIP2-209ENST00000493166 MDGA2Q7Z553 956 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 DND1Q8IYX4 353 aaKnown RBP11.81□□□□□ -0.52
CLIP2-209ENST00000493166 ZNF441Q8N8Z8 693 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 C17orf47Q8NEP4 570 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 OR7G2Q8NG99 324 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 OR7A2PQ8NGA2 310 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 ADIPOR1Q96A54 375 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 SPACA9Q96E40 222 aaPredicted RBP11.81□□□□□ -0.52
CLIP2-209ENST00000493166 ZBED6CLQ96FA7 236 aaPredicted RBP11.81□□□□□ -0.52
CLIP2-209ENST00000493166 C7orf26Q96N11 449 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 TAAR6Q96RI8 345 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 PRPF18Q99633 342 aaKnown RBP11.81□□□□□ -0.52
CLIP2-209ENST00000493166 ITPAQ9BY32 194 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 OLAHQ9NV23 265 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 ATAD3AQ9NVI7 634 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 DDX18Q9NVP1 670 aaKnown RBP11.81□□□□□ -0.52
CLIP2-209ENST00000493166 VPS4AQ9UN37 437 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 MAPRE3Q9UPY8 281 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 DTX4Q9Y2E6 619 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 NBASA2RRP1 2371 aa11.81□□□□□ -0.52
CLIP2-209ENST00000493166 NCKAP5O14513 1909 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 A0A087WV62 115 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 GOLGA8QA0A0J9YX86 632 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 GOLGA8OA6NCC3 632 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 CAPN14A8MX76 684 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 GOLGA8NF8WBI6 632 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 KLRC4-KLRK1H3BQV0 150 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 CRYABP02511 175 aaKnown RBP11.8□□□□□ -0.52
CLIP2-209ENST00000493166 FBXO45P0C2W1 286 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 EPHA3P29320 983 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 TMED10P49755 219 aaKnown RBP11.8□□□□□ -0.52
CLIP2-209ENST00000493166 DIO3P55073 304 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 MANFP55145 182 aaKnown RBP11.8□□□□□ -0.52
CLIP2-209ENST00000493166 CLDN8P56748 225 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 DCAF7P61962 342 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 ZNF791Q3KP31 576 aaPredicted RBP11.8□□□□□ -0.52
CLIP2-209ENST00000493166 FHL5Q5TD97 284 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 NXNQ6DKJ4 435 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 OGFOD2Q6N063 350 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms