RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 FAM58BPP0C7Q3 252 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 NR2F6P10588 404 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 BSGP35613 385 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 GNALP38405 381 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 ASCL1P50553 236 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 NRG3P56975 720 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 CORO7P57737 925 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 EEF1A1P68104 462 aaKnown RBP8.38□□□□□ -1.07
HDAC3-212ENST00000492407 ID2Q02363 134 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 GUCY2DQ02846 1103 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 FUT7Q11130 342 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 DLG1Q12959 904 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 ZNF267Q14586 743 aaPredicted RBP8.38□□□□□ -1.07
HDAC3-212ENST00000492407 RPS6KA2Q15349 733 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 FBXO48Q5FWF7 155 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 ARMC4Q5T2S8 1044 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 EEF1A1P5Q5VTE0 462 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 NSUN5P2Q63ZY6 315 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 C18orf63Q68DL7 685 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 VASNQ6EMK4 673 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 OR52E8Q6IFG1 317 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 CYP20A1Q6UW02 462 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 DGAT2L6Q6ZPD8 337 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 CAPN12Q6ZSI9 719 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 NUDT13Q86X67 352 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 SNX32Q86XE0 403 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 KIF18BQ86Y91 864 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 TGIF2LYQ8IUE0 185 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 CTAGE3PQ8IX95 158 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 LILRB2Q8N423 598 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 NKAIN3Q8N8D7 197 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 SPATA4Q8NEY3 305 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 OR10G3Q8NGC4 313 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 B4GALNT2Q8NHY0 566 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 WDR20Q8TBZ3 569 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 ZFAND2BQ8WV99 257 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 RNASE6Q93091 150 aaKnown RBP8.38□□□□□ -1.07
HDAC3-212ENST00000492407 PPWD1Q96BP3 646 aaKnown RBP8.38□□□□□ -1.07
HDAC3-212ENST00000492407 HSPBAP1Q96EW2 488 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 TMEM41AQ96HV5 264 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 ZNF597Q96LX8 424 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 MOGAT1Q96PD6 335 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 ALPK1Q96QP1 1244 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 SERPINI1Q99574 410 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 TIMP4Q99727 224 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 CNPPD1Q9BV87 410 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 ZNF717Q9BY31 904 aaPredicted RBP8.38□□□□□ -1.07
HDAC3-212ENST00000492407 PRDM14Q9GZV8 571 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 UBQLN3Q9H347 655 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 ACTR8Q9H981 624 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 CALHM2Q9HA72 323 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 CXorf21Q9HAI6 301 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 PRM3Q9NNZ6 103 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 ALKBH4Q9NXW9 302 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 AHSPQ9NZD4 102 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 GRHL1Q9NZI5 618 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 ST6GALNAC2Q9UJ37 374 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 MCM8Q9UJA3 840 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 ADAM29Q9UKF5 820 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 TMCO1Q9UM00 188 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 CFL2Q9Y281 166 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 CARD8Q9Y2G2 431 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 UTP11Q9Y3A2 253 aaKnown RBP8.38□□□□□ -1.07
HDAC3-212ENST00000492407 NPFFR2Q9Y5X5 522 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 GMEB1Q9Y692 573 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.38□□□□□ -1.07
HDAC3-212ENST00000492407 ZFHX3Q15911 3703 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 A0A087WUV0 522 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-212ENST00000492407 A0A1W2PR48 441 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 CD8B2A6NJW9 211 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 A6NNC1 897 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 UBXN8O00124 270 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 HRKO00198 91 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 SAP18O00422 153 aaKnown RBP8.37□□□□□ -1.07
HDAC3-212ENST00000492407 GUCY1B2O75343 617 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 PIAS1O75925 651 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 KLHL2O95198 593 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 CLDN9O95484 217 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 CLPSP04118 112 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 FESP07332 822 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 DNASE1P24855 282 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 OPRM1P35372 400 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 MAGEA4P43358 317 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 CDK9P50750 372 aaKnown RBP8.37□□□□□ -1.07
HDAC3-212ENST00000492407 RPS13P62277 151 aaKnown RBP8.37□□□□□ -1.07
HDAC3-212ENST00000492407 HERVK_113P63132 956 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 ERVK-8P63133 956 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 PPP2R2AP63151 447 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 PSPHP78330 225 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 SORDQ00796 357 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 CRYZQ08257 329 aaKnown RBP8.37□□□□□ -1.07
HDAC3-212ENST00000492407 DUSP8Q13202 625 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 SNTA1Q13424 505 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 ACSF3Q4G176 576 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-212ENST00000492407 FLYWCH1Q4VC44 716 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 LRRC23Q53EV4 343 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-212ENST00000492407 HLA-DQA1Q5Y7H0 255 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 KLC3Q6P597 504 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 SCIMPQ6UWF3 145 aa8.37□□□□□ -1.07
HDAC3-212ENST00000492407 SEM1Q6ZVN7 128 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms