RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 UAP1Q16222 522 aaPredicted RBP7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 UNC50Q53HI1 259 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 CCNYL2Q5T2Q4 361 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 WLSQ5T9L3 541 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 PRAMEF20Q5VT98 475 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 VASNQ6EMK4 673 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 GALNT18Q6P9A2 607 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 TMEM64Q6YI46 380 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 SH2D5Q6ZV89 423 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 TAOK1Q7L7X3 1001 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 ULK2Q8IYT8 1036 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 CNPY4Q8N129 248 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 HGDQ93099 445 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 ATP6V1E2Q96A05 226 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 ERP27Q96DN0 273 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 CNRIP1Q96F85 164 aaPredicted RBP7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 GAL3ST4Q96RP7 486 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 ZNF382Q96SR6 550 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 TIMP4Q99727 224 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 DOHHQ9BU89 302 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 PRDM14Q9GZV8 571 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 NXF5Q9H1B4 397 aaKnown RBP7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 MAT2BQ9NZL9 334 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 TRPS1Q9UHF7 1281 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 DTX4Q9Y2E6 619 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 C15orf41Q9Y2V0 281 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 L3MBTL1Q9Y468 752 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 KIAA1549Q9HCM3 1950 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 ACANP16112 2415 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 HSPB2A8KAH6 182 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 MANBAO00462 879 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 ACOX3O15254 700 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 DLX3O60479 287 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 PPM1BO75688 479 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 CBX7O95931 251 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 RHOXF2BP0C7M4 288 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 DRD2P14416 443 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 IMPDH1P20839 514 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 PTPN6P29350 595 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 PPICP45877 212 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 TMED10P49755 219 aaKnown RBP7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 EMDP50402 254 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 PRKAA2P54646 552 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 RAE1P78406 368 aaKnown RBP7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 CLCQ05315 142 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 DUSP2Q05923 314 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 HSPB2Q16082 182 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 ACSF3Q4G176 576 aaPredicted RBP7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 ZNF678Q5SXM1 525 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 LGSNQ5TDP6 509 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 TMEM198Q66K66 360 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 BICRALQ6AI39 1079 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 TIGD3Q6B0B8 471 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 SLC30A6Q6NXT4 461 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 FAM111BQ6SJ93 734 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 RPS27LQ71UM5 84 aaKnown RBP7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 TRMT10CQ7L0Y3 403 aaKnown RBP7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 NUP54Q7Z3B4 507 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 ADGRE4PQ86SQ3 457 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 CDH24Q86UP0 819 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 PACS2Q86VP3 889 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 CLYBLQ8N0X4 340 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 MMP21Q8N119 569 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 VWA5B2Q8N398 1253 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 NAXEQ8NCW5 288 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 SIMC1Q8NDZ2 872 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 FAM13CQ8NE31 585 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 MNS1Q8NEH6 495 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 ZNF675Q8TD23 568 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 MZB1Q8WU39 189 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 IFT81Q8WYA0 676 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 DIO2Q92813 273 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 MTBPQ96DY7 904 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 L3HYPDHQ96EM0 354 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 HSPBAP1Q96EW2 488 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 ZNF597Q96LX8 424 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 C16orf45Q96MC5 204 aaPredicted RBP7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 RILPQ96NA2 401 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 GNRHR2Q96P88 292 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 UCN2Q96RP3 112 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 SH3GL2Q99962 352 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 SLC6A15Q9H2J7 730 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 EPB41L4BQ9H329 900 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 ELOVL6Q9H5J4 265 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 LDAHQ9H6V9 325 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 NMRK1Q9NWW6 199 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 TAS2R7Q9NYW3 318 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 TMEM216Q9P0N5 145 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 HEY2Q9UBP5 337 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 VPS29Q9UBQ0 182 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 B4GALT7Q9UBV7 327 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 ZNF629Q9UEG4 869 aaPredicted RBP7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 MCM8Q9UJA3 840 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 SNX6Q9UNH7 406 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 SLC12A4Q9UP95 1085 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 CFL2Q9Y281 166 aa7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 GPR55Q9Y2T6 319 aaPredicted RBP7.66□□□□□ -1.18
SMARCB1-207ENST00000491967 HRNRQ86YZ3 2850 aaPredicted RBP7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 MBD3L4A6NDZ8 208 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms