RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 KCNK17Q96T54 332 aa12.52□□□□□ -0.41
ATG4B-222ENST00000491867 KLHL4Q9C0H6 718 aa12.52□□□□□ -0.41
ATG4B-222ENST00000491867 PITHD1Q9GZP4 211 aaPredicted RBP12.52□□□□□ -0.41
ATG4B-222ENST00000491867 SERHLQ9NQF3 203 aa12.52□□□□□ -0.41
ATG4B-222ENST00000491867 CTNNAL1Q9UBT7 734 aa12.52□□□□□ -0.41
ATG4B-222ENST00000491867 DTX4Q9Y2E6 619 aa12.52□□□□□ -0.41
ATG4B-222ENST00000491867 SPACA6W5XKT8 324 aa12.52□□□□□ -0.41
ATG4B-222ENST00000491867 FRG2CA6NGY1 282 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 OR6C76A6NM76 312 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 RTCAO00442 366 aaKnown RBP12.51□□□□□ -0.41
ATG4B-222ENST00000491867 KCNAB3O43448 404 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 ALOX15P16050 662 aaPredicted RBP12.51□□□□□ -0.41
ATG4B-222ENST00000491867 CPN2P22792 545 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 KIR2DL2P43627 348 aaPredicted RBP12.51□□□□□ -0.41
ATG4B-222ENST00000491867 LHX2P50458 406 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 SIRPAP78324 504 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 RPP38P78345 283 aaKnown RBP12.51□□□□□ -0.41
ATG4B-222ENST00000491867 PCDH1Q08174 1060 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 SETDB1Q15047 1291 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 TGFBIQ15582 683 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 ANKMY2Q8IV38 441 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 BBOF1Q8ND07 529 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 C7orf57Q8NEG2 295 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 RDH11Q8TC12 318 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 AKAP1Q92667 903 aaKnown RBP eCLIP12.51□□□□□ -0.41
ATG4B-222ENST00000491867 GTPBP3Q969Y2 492 aaKnown RBP12.51□□□□□ -0.41
ATG4B-222ENST00000491867 VPS39Q96JC1 886 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 PLA2G12AQ9BZM1 189 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 EHD1Q9H4M9 534 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 NT5DC2Q9H857 520 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 METTL7AQ9H8H3 244 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 POPDC3Q9HBV1 291 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 SNX15Q9NRS6 342 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 GPRC5BQ9NZH0 403 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 HEY2Q9UBP5 337 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 DLGAP4Q9Y2H0 992 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 MALRD1Q5VYJ5 2156 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 NOTCH1P46531 2555 aa12.51□□□□□ -0.41
ATG4B-222ENST00000491867 PLCE1Q9P212 2302 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 C2orf92A0A1B0GVN3 265 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 C2orf72A6NCS6 295 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 NCF1BA6NI72 391 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-222ENST00000491867 NCF1CA8MVU1 366 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-222ENST00000491867 HCRTR2O43614 444 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 OR10H2O60403 315 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 SEC31AO94979 1220 aaKnown RBP12.5□□□□□ -0.41
ATG4B-222ENST00000491867 CLPSP04118 112 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 NCF1P14598 390 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-222ENST00000491867 TBXA2RP21731 343 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 THBS2P35442 1172 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 GMPRP36959 345 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 CDKN1AP38936 164 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 TMED10P49755 219 aaKnown RBP12.5□□□□□ -0.41
ATG4B-222ENST00000491867 ARL4CP56559 192 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 DR1Q01658 176 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 FASTKD3Q14CZ7 662 aaKnown RBP12.5□□□□□ -0.41
ATG4B-222ENST00000491867 OR2A2Q6IF42 318 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 DNM1P46Q6ZS02 220 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 PRR22Q8IZ63 422 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 ZNF610Q8N9Z0 462 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 PLPPR2Q96GM1 343 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 ZNF845Q96IR2 970 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-222ENST00000491867 TMEM79Q9BSE2 394 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 TMEM204Q9BSN7 226 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 MCMBPQ9BTE3 642 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 CAPS2Q9BXY5 557 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 OR2B2Q9GZK3 357 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 ROGDIQ9GZN7 287 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 DERL2Q9GZP9 239 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 RHOJQ9H4E5 214 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 RPF2Q9H7B2 306 aaKnown RBP12.5□□□□□ -0.41
ATG4B-222ENST00000491867 DNAJC11Q9NVH1 559 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 MOCS1Q9NZB8 636 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 ZNF490Q9ULM2 529 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-222ENST00000491867 RNF112Q9ULX5 631 aa12.5□□□□□ -0.41
ATG4B-222ENST00000491867 SLC22A20A6NK97 555 aa12.49□□□□□ -0.41
ATG4B-222ENST00000491867 TP73O15350 636 aa12.49□□□□□ -0.41
ATG4B-222ENST00000491867 TAPBPO15533 448 aa12.49□□□□□ -0.41
ATG4B-222ENST00000491867 PRAMEF4O60810 478 aa12.49□□□□□ -0.41
ATG4B-222ENST00000491867 CDH16O75309 829 aa12.49□□□□□ -0.41
ATG4B-222ENST00000491867 SIX3O95343 332 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-222ENST00000491867 WISP3O95389 354 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-222ENST00000491867 CGAP01215 116 aa12.49□□□□□ -0.41
ATG4B-222ENST00000491867 IGHV4-39P01824 125 aa12.49□□□□□ -0.41
ATG4B-222ENST00000491867 SOD3P08294 240 aa12.49□□□□□ -0.41
ATG4B-222ENST00000491867 TCP1P17987 556 aaKnown RBP12.49□□□□□ -0.41
ATG4B-222ENST00000491867 HIST1H1TP22492 207 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-222ENST00000491867 GGT5P36269 586 aa12.49□□□□□ -0.41
ATG4B-222ENST00000491867 GFRA1P56159 465 aa12.49□□□□□ -0.41
ATG4B-222ENST00000491867 CLDN18P56856 261 aa12.49□□□□□ -0.41
ATG4B-222ENST00000491867 NRG3P56975 720 aa12.49□□□□□ -0.41
ATG4B-222ENST00000491867 PDIA2Q13087 525 aaKnown RBP12.49□□□□□ -0.41
ATG4B-222ENST00000491867 BIKQ13323 160 aa12.49□□□□□ -0.41
ATG4B-222ENST00000491867 EXOC3L2Q2M3D2 409 aa12.49□□□□□ -0.41
ATG4B-222ENST00000491867 SPRED3Q2MJR0 410 aa12.49□□□□□ -0.41
ATG4B-222ENST00000491867 PRAMEF9Q5VWM5 478 aa12.49□□□□□ -0.41
ATG4B-222ENST00000491867 HLA-DQA1Q5Y7H0 255 aa12.49□□□□□ -0.41
ATG4B-222ENST00000491867 MILR1Q7Z6M3 343 aa12.49□□□□□ -0.41
ATG4B-222ENST00000491867 IFNEQ86WN2 208 aa12.49□□□□□ -0.41
ATG4B-222ENST00000491867 KLHL7Q8IXQ5 586 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms