RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 SOWAHCQ53LP3 525 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-219ENST00000491747 NUP210LQ5VU65 1888 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 MRPL14Q6P1L8 145 aaKnown RBP8.85□□□□□ -0.99
BRCA1-219ENST00000491747 CDYL2Q8N8U2 506 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 EXD3Q8N9H8 876 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 PIK3C3Q8NEB9 887 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 OR2T12Q8NG77 320 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 SLC5A11Q8WWX8 675 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 ALPK1Q96QP1 1244 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 CD274Q9NZQ7 290 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 TCFL5Q9UL49 500 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 MAGED1Q9Y5V3 778 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-219ENST00000491747 CDC14CA4D256 554 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 E2F3O00716 465 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 FOXS1O43638 330 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 OR4F21O95013 312 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 HOXB6P17509 224 aaKnown RBP8.85□□□□□ -0.99
BRCA1-219ENST00000491747 EPORP19235 508 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 ARL1P40616 181 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-219ENST00000491747 CCR8P51685 355 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 RAD23AP54725 363 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 RPS3AP61247 264 aaKnown RBP8.85□□□□□ -0.99
BRCA1-219ENST00000491747 RPS15AP62244 130 aaKnown RBP8.85□□□□□ -0.99
BRCA1-219ENST00000491747 MEP1AQ16819 746 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 DEFB109BQ30KR1 87 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 FAM214AQ32MH5 1076 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 CRTC2Q53ET0 693 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-219ENST00000491747 NXPE4Q6UWF7 544 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 SLC16A12Q6ZSM3 486 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 Q6ZSR9 355 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 PRSS41Q7RTY9 318 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 EID3Q8N140 333 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 OR7A2PQ8NGA2 310 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 ADAMTS17Q8TE56 1095 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 FIG4Q92562 907 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 VMP1Q96GC9 406 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 ORC6Q9Y5N6 252 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 LOC100130705A0A1B0GUX0 176 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 ERVH48-1M5A8F1 160 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 SLC1A7O00341 560 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 FFAR3O14843 346 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 SLC22A1O15245 554 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 GPR42O15529 346 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 HTR1AP08908 422 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 CCDC159P0C7I6 412 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 G6PDP11413 515 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 SERPINB10P48595 397 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 CD47Q08722 323 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 KCNAB2Q13303 367 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 IL18R1Q13478 541 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 AQP6Q13520 282 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 LY6DQ14210 128 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 SELPLGQ14242 412 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 NR6A1Q15406 480 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 CTF1Q16619 201 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 RFX4Q33E94 735 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 CDKL4Q5MAI5 379 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 YOD1Q5VVQ6 348 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-219ENST00000491747 CYP20A1Q6UW02 462 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 TMPRSS11BQ86T26 416 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 ANKRD53Q8N9V6 530 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 MFSD9Q8NBP5 474 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 KCT2Q8NC54 265 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 FBXO30Q8TB52 745 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 METTL6Q8TCB7 284 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 POP5Q969H6 163 aaKnown RBP8.84□□□□□ -0.99
BRCA1-219ENST00000491747 RERGQ96A58 199 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-219ENST00000491747 SLC47A1Q96FL8 570 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 ZNF583Q96ND8 569 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 UBL7Q96S82 380 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-219ENST00000491747 MBOAT4Q96T53 435 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 SH3GL1Q99961 368 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 SARGQ9BW04 601 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 SEMA4CQ9C0C4 833 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 AMBRA1Q9C0C7 1298 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 SMURF2Q9HAU4 748 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 WWOXQ9NZC7 414 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 ADGRE2Q9UHX3 823 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 NAALAD2Q9Y3Q0 740 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 DYRK1BQ9Y463 629 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 TRBC2A0A5B9 178 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 ZNF99A8MXY4 864 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-219ENST00000491747 M0R3G1 203 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 ATXN7O15265 892 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-219ENST00000491747 OR1F1O43749 312 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 E2F6O75461 281 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 GABARAPO95166 117 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 ITGB2P05107 769 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 UMODP07911 640 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 HPCAL1P37235 193 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 PIGAP37287 484 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 REEP5Q00765 189 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 UGT8Q16880 541 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 SLCO4C1Q6ZQN7 724 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 OVCH1Q7RTY7 1134 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 TCAIMQ8N3R3 496 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 OR52E4Q8NGH9 312 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 SGCDQ92629 289 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 SLC35B4Q969S0 331 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 ZBTB18Q99592 522 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms