RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 ABCB1P08183 1280 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-211ENST00000491581 IL3P08700 152 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 RHOXF2BP0C7M4 288 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 BMP5P22003 454 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 ABCD3P28288 659 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 SERPINB3P29508 390 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 SERPINB1P30740 379 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 SSTR2P30874 369 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 TLX1P31314 330 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-211ENST00000491581 HSD17B3P37058 310 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 CASP3P42574 277 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 ZFP36L2P47974 494 aaKnown RBP8.14□□□□□ -1.11
HDAC3-211ENST00000491581 STARP49675 285 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 MAPK12P53778 367 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 NAGLUP54802 743 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 FUT7Q11130 342 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 FOXF2Q12947 444 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 MYBPHQ13203 477 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 RPS6KA2Q15349 733 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 WLSQ5T9L3 541 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 TMEM211Q6ICI0 200 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 SLC48A1Q6P1K1 146 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 PAOXQ6QHF9 649 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 ANGPTL8Q6UXH0 198 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 NPSR1Q6W5P4 371 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 CCDC116Q8IYX3 515 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 OR52R1Q8NGF1 315 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 OR9A2Q8NGT5 310 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 CDC26Q8NHZ8 85 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 HGDQ93099 445 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 EXOSC8Q96B26 276 aaKnown RBP8.14□□□□□ -1.11
HDAC3-211ENST00000491581 ZBTB9Q96C00 473 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 KLHL29Q96CT2 875 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 ZNF681Q96N22 645 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 SERPINI1Q99574 410 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 TIMP4Q99727 224 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 RHOXF2Q9BQY4 288 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 GPATCH1Q9BRR8 931 aaKnown RBP8.14□□□□□ -1.11
HDAC3-211ENST00000491581 ACPTQ9BZG2 426 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 RTN4RQ9BZR6 473 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 ELOVL6Q9H5J4 265 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 SERHLQ9NQF3 203 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 ADGRE2Q9UHX3 823 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 EMCNQ9ULC0 261 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 CAMK2AQ9UQM7 478 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 L3MBTL1Q9Y468 752 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 HRNRQ86YZ3 2850 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-211ENST00000491581 TEP1Q99973 2627 aaKnown RBP8.14□□□□□ -1.11
HDAC3-211ENST00000491581 TACC2O95359 2948 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 EXOC1LA0A1B0GW35 172 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 CCDC189A1A4V9 331 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 OR14I1A6ND48 311 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 FIGNL2A6NMB9 653 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 CDK2AP1O14519 115 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 BCKDKO14874 412 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 GMFGO60234 142 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 SUSD5O60279 629 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 UGDHO60701 494 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 SEMA3DO95025 777 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 HOXD4P09016 255 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-211ENST00000491581 RBP1P09455 135 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 PORP16435 677 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-211ENST00000491581 BMP7P18075 431 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 PTPN6P29350 595 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 UQCRC1P31930 480 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 EMDP50402 254 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 ZNF136P52737 540 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 PHEXP78562 749 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 SRYQ05066 204 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 CLCQ05315 142 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 IFT88Q13099 833 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 WHAMMP3Q1A5X7 153 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 ACSF3Q4G176 576 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-211ENST00000491581 ZNF678Q5SXM1 525 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 RELL1Q8IUW5 271 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 VWA5B2Q8N398 1253 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 C9orf106Q8NAJ2 232 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 FAM83FQ8NEG4 500 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-211ENST00000491581 OR5M1Q8NGP8 315 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 MZB1Q8WU39 189 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 NUDT8Q8WV74 236 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 ASB5Q8WWX0 329 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 NTNG2Q96CW9 530 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 REPS1Q96D71 796 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 OMA1Q96E52 524 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 ART5Q96L15 291 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 ZNF597Q96LX8 424 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 DOCK7Q96N67 2140 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 TRIB1Q96RU8 372 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 ZNF559Q9BR84 538 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 CENPKQ9BS16 269 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 UGT2B28Q9BY64 529 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 ANGPTL4Q9BY76 406 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 MRPL46Q9H2W6 279 aaKnown RBP8.13□□□□□ -1.11
HDAC3-211ENST00000491581 UBQLN3Q9H347 655 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 GSTO2Q9H4Y5 243 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 RUBCNLQ9H714 662 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 WDR41Q9HAD4 459 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 CRIM1Q9NZV1 1036 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 MTRF1LQ9UGC7 380 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms