RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 PARVGQ9HBI0 331 aa2.73□□□□□ -1.97
PHC3-213ENST00000491258 ZFP14Q9HCL3 533 aa2.73□□□□□ -1.97
PHC3-213ENST00000491258 HEBP1Q9NRV9 189 aa2.73□□□□□ -1.97
PHC3-213ENST00000491258 BLOC1S4Q9NUP1 217 aa2.73□□□□□ -1.97
PHC3-213ENST00000491258 TUBGCP4Q9UGJ1 667 aa2.73□□□□□ -1.97
PHC3-213ENST00000491258 CPSF3Q9UKF6 684 aaKnown RBP2.73□□□□□ -1.97
PHC3-213ENST00000491258 ELF5Q9UKW6 265 aaPredicted RBP2.73□□□□□ -1.97
PHC3-213ENST00000491258 ODF2LQ9ULJ1 636 aa2.73□□□□□ -1.97
PHC3-213ENST00000491258 UBQLN1Q9UMX0 589 aaKnown RBP2.73□□□□□ -1.97
PHC3-213ENST00000491258 PADI2Q9Y2J8 665 aa2.73□□□□□ -1.97
PHC3-213ENST00000491258 KIF3AQ9Y496 699 aa2.73□□□□□ -1.97
PHC3-213ENST00000491258 REV3LO60673 3130 aa2.73□□□□□ -1.97
PHC3-213ENST00000491258 FOCADQ5VW36 1801 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 NCOR1O75376 2440 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 MYH1P12882 1939 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 ALPK3Q96L96 1907 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 A0A1B0GTH9 108 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 A0A1W2PQ09 198 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 MTMR11A4FU01 709 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 ARHGEF33A8MVX0 844 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 K7ENM7 598 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 CYB561D2O14569 222 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 CHADO15335 359 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 ANPEPP15144 967 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 PSMC3P17980 439 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 NMT1P30419 496 aaKnown RBP2.72□□□□□ -1.97
PHC3-213ENST00000491258 PKLRP30613 574 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 GCH1P30793 250 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 GDI1P31150 447 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 PSMB10P40306 273 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 MAGEA9P43362 315 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 TUFMP49411 452 aaKnown RBP2.72□□□□□ -1.97
PHC3-213ENST00000491258 ACOT2P49753 483 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 LIG4P49917 911 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 PNLIPRP2P54317 469 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 ACY1Q03154 408 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 YWHAHQ04917 246 aaPredicted RBP2.72□□□□□ -1.97
PHC3-213ENST00000491258 TRAP1Q12931 704 aaKnown RBP2.72□□□□□ -1.97
PHC3-213ENST00000491258 CUL4AQ13619 759 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 KARSQ15046 597 aaKnown RBP2.72□□□□□ -1.97
PHC3-213ENST00000491258 SIX1Q15475 284 aaPredicted RBP2.72□□□□□ -1.97
PHC3-213ENST00000491258 WSCD1Q658N2 575 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 KRTAP5-7Q6L8G8 165 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 ARMCX5Q6P1M9 558 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 NUP54Q7Z3B4 507 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 DNAJB7Q7Z6W7 309 aaPredicted RBP2.72□□□□□ -1.97
PHC3-213ENST00000491258 VASH2Q86V25 355 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 HIPK1Q86Z02 1210 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 MFSD6LQ8IWD5 586 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 NDUFAF2Q8N183 169 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 ELMOD1Q8N336 334 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 C17orf53Q8N3J3 647 aaPredicted RBP2.72□□□□□ -1.97
PHC3-213ENST00000491258 OR10T2Q8NGX3 314 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 FAM3CQ92520 227 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 PIK3R3Q92569 461 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 DNASE1L2Q92874 299 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 PSMG2Q969U7 264 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 SLAMF9Q96A28 289 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 DNAJC19Q96DA6 116 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 RMDN1Q96DB5 314 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 EPSTI1Q96J88 318 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 CCSER1Q9C0I3 900 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 GPR88Q9GZN0 384 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 ASB7Q9H672 318 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 SYNCQ9H7C4 482 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 RPF1Q9H9Y2 349 aaKnown RBP2.72□□□□□ -1.97
PHC3-213ENST00000491258 LMAN1LQ9HAT1 526 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 PRMT8Q9NR22 394 aaPredicted RBP2.72□□□□□ -1.97
PHC3-213ENST00000491258 IL17CQ9P0M4 197 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 ZNF69Q9UC07 566 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 IL17BQ9UHF5 180 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 FBXO2Q9UK22 296 aaPredicted RBP2.72□□□□□ -1.97
PHC3-213ENST00000491258 SMC3Q9UQE7 1217 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 PTRH2Q9Y3E5 179 aaKnown RBP2.72□□□□□ -1.97
PHC3-213ENST00000491258 ASB3Q9Y575 518 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 AK9Q5TCS8 1911 aa2.72□□□□□ -1.97
PHC3-213ENST00000491258 BPTFQ12830 3046 aa2.71□□□□□ -1.97
PHC3-213ENST00000491258 SPTBN4Q9H254 2564 aa2.71□□□□□ -1.98
PHC3-213ENST00000491258 MGAMO43451 1857 aa2.71□□□□□ -1.98
PHC3-213ENST00000491258 DMDP11532 3685 aa2.71□□□□□ -1.98
PHC3-213ENST00000491258 CACNA1HO95180 2353 aa2.71□□□□□ -1.98
PHC3-213ENST00000491258 MYBPHLA2RUH7 354 aa2.71□□□□□ -1.98
PHC3-213ENST00000491258 ZNF263O14978 683 aa2.71□□□□□ -1.98
PHC3-213ENST00000491258 KINO60870 393 aaKnown RBP2.71□□□□□ -1.98
PHC3-213ENST00000491258 TBCAO75347 108 aaKnown RBP2.71□□□□□ -1.98
PHC3-213ENST00000491258 PRAMEF12O95522 483 aa2.71□□□□□ -1.98
PHC3-213ENST00000491258 FGF19O95750 216 aa2.71□□□□□ -1.98
PHC3-213ENST00000491258 IGHV2-70P01814 119 aa2.71□□□□□ -1.98
PHC3-213ENST00000491258 IGKV3-11P04433 115 aa2.71□□□□□ -1.98
PHC3-213ENST00000491258 ODC1P11926 461 aa2.71□□□□□ -1.98
PHC3-213ENST00000491258 IRF2P14316 349 aa2.71□□□□□ -1.98
PHC3-213ENST00000491258 HMGA1P17096 107 aaKnown RBP2.71□□□□□ -1.98
PHC3-213ENST00000491258 SYT1P21579 422 aa2.71□□□□□ -1.98
PHC3-213ENST00000491258 CCNE1P24864 410 aa2.71□□□□□ -1.98
PHC3-213ENST00000491258 HOXA6P31267 233 aa2.71□□□□□ -1.98
PHC3-213ENST00000491258 MATR3P43243 847 aaKnown RBP eCLIP2.71□□□□□ -1.98
PHC3-213ENST00000491258 CXCL12P48061 93 aa2.71□□□□□ -1.98
PHC3-213ENST00000491258 VAMP7P51809 220 aa2.71□□□□□ -1.98
PHC3-213ENST00000491258 SRPXP78539 464 aa2.71□□□□□ -1.98
PHC3-213ENST00000491258 RBP5P82980 135 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms