RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 NODALQ96S42 347 aa12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 OSBPL11Q9BXB4 747 aa12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 TRIM54Q9BYV2 358 aa12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 RNF122Q9H9V4 155 aa12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 IKZF3Q9UKT9 509 aa12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 PACSIN2Q9UNF0 486 aaPredicted RBP12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 NOTCH1P46531 2555 aa12.27□□□□□ -0.44
EXOSC3-207ENST00000490516 TRRAPQ9Y4A5 3859 aa12.27□□□□□ -0.44
EXOSC3-207ENST00000490516 TCRBV7S3A2A0A539 114 aa12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 H0YC42 278 aa12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 AP3B1O00203 1094 aa12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 CDH16O75309 829 aa12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 PRKRAO75569 313 aaKnown RBP12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 ATP5A1P25705 553 aaKnown RBP12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 ABCD3P28288 659 aa12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 CDKN2DP55273 166 aa12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 TPD52P55327 224 aaPredicted RBP12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 CLDN15P56746 228 aa12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 DSCR9P59020 149 aa12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 RPS13P62277 151 aaKnown RBP12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 TPM4P67936 248 aa12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 IRX1P78414 480 aaPredicted RBP12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 LSM11P83369 360 aaKnown RBP eCLIP12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 GUSBP1Q15486 140 aa12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 SPRED3Q2MJR0 410 aa12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 HLA-DQA1Q5Y7H0 255 aa12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 SLC30A6Q6NXT4 461 aa12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 FNDC9Q8TBE3 224 aa12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 C1orf54Q8WWF1 131 aa12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 ZNF669Q96BR6 464 aaPredicted RBP12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 TACO1Q9BSH4 297 aaKnown RBP12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 PINK1Q9BXM7 581 aa12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 MOCS1Q9NZB8 636 aa12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 FBXL2Q9UKC9 423 aa12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 SPACA6W5XKT8 324 aa12.27□□□□□ -0.45
EXOSC3-207ENST00000490516 WASHC1A8K0Z3 465 aa12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 DLX3O60479 287 aa12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 RHOXF2BP0C7M4 288 aa12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 USF1P22415 310 aaPredicted RBP12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 HPDP32754 393 aaPredicted RBP12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 KCNC1P48547 511 aa12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 GZMKP49863 264 aa12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 NAP1L1P55209 391 aaKnown RBP12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 NRG3P56975 720 aa12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 FGFBP1Q14512 234 aa12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 CTU2Q2VPK5 515 aaKnown RBP12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 C18orf21Q32NC0 220 aaPredicted RBP12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 DNAJC14Q6Y2X3 702 aaPredicted RBP12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 FAM214BQ7L5A3 538 aa12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 DTX2Q86UW9 622 aa12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 GPSM1Q86YR5 675 aa12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 ST13P4Q8IZP2 240 aaPredicted RBP12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 RIT1Q92963 219 aa12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 HGDQ93099 445 aa12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 ADIPOR1Q96A54 375 aa12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 MSI2Q96DH6 328 aaKnown RBP12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 KCNC2Q96PR1 638 aa12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 RPF2Q9H7B2 306 aaKnown RBP12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 TAS2R13Q9NYV9 303 aa12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 KLRF1Q9NZS2 232 aa12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 FBXO5Q9UKT4 447 aa12.26□□□□□ -0.45
EXOSC3-207ENST00000490516 ZCWPW2A0A1B0GU75 182 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 GRID2IPA4D2P6 1211 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 SH3BGRLO75368 114 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 PPM1BO75688 479 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 VENTXO95231 258 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 KRT15P19012 456 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 GNAZP19086 355 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 CNTFP26441 200 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 GSTM2P28161 218 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 SRD5A2P31213 254 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 GDF5P43026 501 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 SUCLG1P53597 346 aaKnown RBP12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 TERF1P54274 439 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 TGM3Q08188 693 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 PON3Q15166 354 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 NNATQ16517 81 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 BCL2A1Q16548 175 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 RBM20Q5T481 1227 aaKnown RBP12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 C18orf63Q68DL7 685 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 TMEM81Q6P7N7 255 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 KRT78Q8N1N4 520 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 C7orf57Q8NEG2 295 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 C10orf105Q8TEF2 133 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 FAM168AQ92567 244 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 ADAD1Q96M93 576 aaKnown RBP12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 CACNG6Q9BXT2 260 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 TSGA10Q9BZW7 698 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 TRIM2Q9C040 744 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 GRIP2Q9C0E4 1043 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 NT5DC2Q9H857 520 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 PLSCR4Q9NRQ2 329 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 ZNF490Q9ULM2 529 aaPredicted RBP12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 PCNX3Q9H6A9 2034 aa12.25□□□□□ -0.45
EXOSC3-207ENST00000490516 UQCRHLA0A096LP55 91 aa12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 ZIC3O60481 467 aa12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 WDR47O94967 919 aa12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 HIST1H1TP22492 207 aaPredicted RBP12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 COMPP49747 757 aaPredicted RBP12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 NEK2P51955 445 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms