RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 NUDT17P0C025 328 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 UROSP10746 265 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 GPX3P22352 226 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 MASP1P48740 699 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 FBXW4P57775 412 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 DCAF7P61962 342 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 VSNL1P62760 191 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 RAE1P78406 368 aaKnown RBP16.05■□□□□ 0.16
SEC13-218ENST00000490283 SLC18A2Q05940 514 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 ZNF763Q0D2J5 394 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 EXOSC7Q15024 291 aaKnown RBP16.05■□□□□ 0.16
SEC13-218ENST00000490283 ZNF630Q2M218 657 aaPredicted RBP16.05■□□□□ 0.16
SEC13-218ENST00000490283 ERCC6LQ2NKX8 1250 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 EMBQ6PCB8 327 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 FAM111BQ6SJ93 734 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 TMEM64Q6YI46 380 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 TRILQ7L0X0 811 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 LIX1Q8N485 282 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 ADCY4Q8NFM4 1077 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 CA5BP1Q8WTZ4 195 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 ADIPOR1Q96A54 375 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 EXOSC8Q96B26 276 aaKnown RBP16.05■□□□□ 0.16
SEC13-218ENST00000490283 SARAFQ96BY9 339 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 HSPBAP1Q96EW2 488 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 CNRIP1Q96F85 164 aaPredicted RBP16.05■□□□□ 0.16
SEC13-218ENST00000490283 APOPT1Q96IL0 206 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 DMRTA2Q96SC8 542 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 MIEF1Q9NQG6 463 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 QPCTLQ9NXS2 382 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 EHD3Q9NZN3 535 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 HEY2Q9UBP5 337 aa16.05■□□□□ 0.16
SEC13-218ENST00000490283 CNOT11Q9UKZ1 510 aaKnown RBP16.05■□□□□ 0.16
SEC13-218ENST00000490283 TRGV5A0A0B4J1U4 118 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 ANKRD33BA6NCL7 494 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 AQP7O14520 342 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 ACOX3O15254 700 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 RSL1D1O76021 490 aaKnown RBP16.04■□□□□ 0.16
SEC13-218ENST00000490283 SNX4O95219 450 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 LRATO95237 230 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 SLU7O95391 586 aaKnown RBP16.04■□□□□ 0.16
SEC13-218ENST00000490283 CHEK2O96017 543 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 COX6B1P14854 86 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 NAGAP17050 411 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 S1PR1P21453 382 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 MPIP34949 423 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 FOXA1P55317 472 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 PLCXD2Q0VAA5 305 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 LTB4RQ15722 352 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 WLSQ5T9L3 541 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 FAM180BQ6P0A1 224 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 NCCRP1Q6ZVX7 275 aaPredicted RBP16.04■□□□□ 0.16
SEC13-218ENST00000490283 PACS2Q86VP3 889 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 CCDC116Q8IYX3 515 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 PRR22Q8IZ63 422 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 OR52R1Q8NGF1 315 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 OR2W6PQ8NHA6 318 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 FAM76AQ8TAV0 307 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 SPPL2AQ8TCT8 520 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 ZNF675Q8TD23 568 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 SDCCAG3Q96C92 435 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 ERP27Q96DN0 273 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 LCORQ96JN0 433 aaPredicted RBP16.04■□□□□ 0.16
SEC13-218ENST00000490283 ZNF681Q96N22 645 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 BBS4Q96RK4 519 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 TRMOQ9BU70 441 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 ITPAQ9BY32 194 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 NXF5Q9H1B4 397 aaKnown RBP16.04■□□□□ 0.16
SEC13-218ENST00000490283 ZNF703Q9H7S9 590 aaPredicted RBP16.04■□□□□ 0.16
SEC13-218ENST00000490283 SLC35C2Q9NQQ7 365 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 SIRT5Q9NXA8 310 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 MKS1Q9NXB0 559 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 ZNF639Q9UID6 485 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 ACAD8Q9UKU7 415 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 PLLPQ9Y342 182 aa16.04■□□□□ 0.16
SEC13-218ENST00000490283 A0A1B0GVC2 190 aa16.03■□□□□ 0.16
SEC13-218ENST00000490283 ADAM10O14672 748 aa16.03■□□□□ 0.16
SEC13-218ENST00000490283 TRIM13O60858 407 aa16.03■□□□□ 0.16
SEC13-218ENST00000490283 PCSK2P16519 638 aa16.03■□□□□ 0.16
SEC13-218ENST00000490283 DDCP20711 480 aa16.03■□□□□ 0.16
SEC13-218ENST00000490283 GDF1P27539 372 aa16.03■□□□□ 0.16
SEC13-218ENST00000490283 ABCD3P28288 659 aa16.03■□□□□ 0.16
SEC13-218ENST00000490283 MRPS35P82673 323 aaKnown RBP16.03■□□□□ 0.16
SEC13-218ENST00000490283 C2orf80Q0P641 193 aa16.03■□□□□ 0.16
SEC13-218ENST00000490283 MGAT2Q10469 447 aa16.03■□□□□ 0.16
SEC13-218ENST00000490283 NNATQ16517 81 aa16.03■□□□□ 0.16
SEC13-218ENST00000490283 GXYLT1Q4G148 440 aa16.03■□□□□ 0.16
SEC13-218ENST00000490283 TRMT12Q53H54 448 aaKnown RBP16.03■□□□□ 0.16
SEC13-218ENST00000490283 ZNF585AQ6P3V2 769 aa16.03■□□□□ 0.16
SEC13-218ENST00000490283 ACAD11Q709F0 780 aa16.03■□□□□ 0.16
SEC13-218ENST00000490283 TRIM46Q7Z4K8 759 aa16.03■□□□□ 0.16
SEC13-218ENST00000490283 C10orf107Q8IVU9 208 aa16.03■□□□□ 0.16
SEC13-218ENST00000490283 SRRM1Q8IYB3 904 aaKnown RBP16.03■□□□□ 0.16
SEC13-218ENST00000490283 FAM9CQ8IZT9 166 aa16.03■□□□□ 0.16
SEC13-218ENST00000490283 ASB5Q8WWX0 329 aa16.03■□□□□ 0.16
SEC13-218ENST00000490283 RND1Q92730 232 aa16.03■□□□□ 0.16
SEC13-218ENST00000490283 CTHRC1Q96CG8 243 aa16.03■□□□□ 0.16
SEC13-218ENST00000490283 RILPQ96NA2 401 aa16.03■□□□□ 0.16
SEC13-218ENST00000490283 ROPN1BQ9BZX4 212 aaPredicted RBP16.03■□□□□ 0.16
SEC13-218ENST00000490283 C12orf65Q9H3J6 166 aaKnown RBP16.03■□□□□ 0.16
SEC13-218ENST00000490283 METTL7AQ9H8H3 244 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms