RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 MTERF1Q99551 399 aaKnown RBP12.69□□□□□ -0.38
VARS-227ENST00000489979 G6PC3Q9BUM1 346 aa12.69□□□□□ -0.38
VARS-227ENST00000489979 ZNF717Q9BY31 904 aaPredicted RBP12.69□□□□□ -0.38
VARS-227ENST00000489979 OR10A5Q9H207 317 aa12.69□□□□□ -0.38
VARS-227ENST00000489979 ACBD3Q9H3P7 528 aa12.69□□□□□ -0.38
VARS-227ENST00000489979 SMYD2Q9NRG4 433 aa12.69□□□□□ -0.38
VARS-227ENST00000489979 LYARQ9NX58 379 aaKnown RBP12.69□□□□□ -0.38
VARS-227ENST00000489979 KLHL28Q9NXS3 571 aa12.69□□□□□ -0.38
VARS-227ENST00000489979 NSMCE4AQ9NXX6 385 aa12.69□□□□□ -0.38
VARS-227ENST00000489979 CLCF1Q9UBD9 225 aa12.69□□□□□ -0.38
VARS-227ENST00000489979 ADGRE2Q9UHX3 823 aa12.69□□□□□ -0.38
VARS-227ENST00000489979 RNF112Q9ULX5 631 aa12.69□□□□□ -0.38
VARS-227ENST00000489979 ROS1P08922 2347 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 A0A0A6YYD5 115 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 CDH16O75309 829 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 TNFSF13O75888 250 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 CNOT4O95628 575 aaKnown RBP12.68□□□□□ -0.38
VARS-227ENST00000489979 AIFM1O95831 613 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 ABCB1P08183 1280 aaPredicted RBP12.68□□□□□ -0.38
VARS-227ENST00000489979 FAM58BPP0C7Q3 252 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 MC3RP41968 323 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 PIK3CBP42338 1070 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 EEF1A1P68104 462 aaKnown RBP12.68□□□□□ -0.38
VARS-227ENST00000489979 FUT7Q11130 342 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 CBLBQ13191 982 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 GAB1Q13480 694 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 KBTBD12Q3ZCT8 623 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 EEF1A1P5Q5VTE0 462 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 GRHL2Q6ISB3 625 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 CYP20A1Q6UW02 462 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 ENPP6Q6UWR7 440 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 TRIM42Q8IWZ5 723 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 GALNT12Q8IXK2 581 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 FBXO36Q8NEA4 188 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 OR14L1PQ8NHC6 308 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 PPP1R14CQ8TAE6 165 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 RDH11Q8TC12 318 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 TSPAN17Q96FV3 270 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 OSBPL9Q96SU4 736 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 OR2B2Q9GZK3 357 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 NXF5Q9H1B4 397 aaKnown RBP12.68□□□□□ -0.38
VARS-227ENST00000489979 WDR41Q9HAD4 459 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 GALNT9Q9HCQ5 603 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 SERHLQ9NQF3 203 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 MAPRE3Q9UPY8 281 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 PPP2R2CQ9Y2T4 447 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 WIF1Q9Y5W5 379 aa12.68□□□□□ -0.38
VARS-227ENST00000489979 RAI1Q7Z5J4 1906 aaPredicted RBP12.68□□□□□ -0.38
VARS-227ENST00000489979 SONP18583 2426 aaKnown RBP12.68□□□□□ -0.38
VARS-227ENST00000489979 A0A1W2PNV4 684 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 K7EPI3 171 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 MSTNO14793 375 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 PGRMC2O15173 223 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 ICOSLGO75144 302 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 PPM1BO75688 479 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 SMNDC1O75940 238 aaKnown RBP eCLIP12.67□□□□□ -0.38
VARS-227ENST00000489979 GPX3P22352 226 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 CRYGSP22914 178 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 BSGP35613 385 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 GMPRP36959 345 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 PTGDSP41222 190 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 STARP49675 285 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 ARFIP1P53367 373 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 PDIA2Q13087 525 aaKnown RBP12.67□□□□□ -0.38
VARS-227ENST00000489979 NNATQ16517 81 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 SLC30A6Q6NXT4 461 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 SCIMPQ6UWF3 145 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 C20orf204Q6ZNR8 217 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 MYLK4Q86YV6 388 aaPredicted RBP12.67□□□□□ -0.38
VARS-227ENST00000489979 GRAMD2AQ8IUY3 354 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 C17orf47Q8NEP4 570 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 HGDQ93099 445 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 NODALQ96S42 347 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 MED18Q9BUE0 208 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 OSBPL11Q9BXB4 747 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 ALG9Q9H6U8 611 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 DDX31Q9H8H2 851 aaKnown RBP12.67□□□□□ -0.38
VARS-227ENST00000489979 ACTR8Q9H981 624 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 ZNF226Q9NYT6 803 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 NUDT4Q9NZJ9 180 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 KLRF1Q9NZS2 232 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 OPTCQ9UBM4 332 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 EXO1Q9UQ84 846 aaKnown RBP12.67□□□□□ -0.38
VARS-227ENST00000489979 DTX4Q9Y2E6 619 aa12.67□□□□□ -0.38
VARS-227ENST00000489979 USF3Q68DE3 2245 aa12.66□□□□□ -0.38
VARS-227ENST00000489979 SUPT3HB4E1H0 165 aa12.66□□□□□ -0.38
VARS-227ENST00000489979 PLOD2O00469 737 aa12.66□□□□□ -0.38
VARS-227ENST00000489979 SUPT3HO75486 399 aa12.66□□□□□ -0.38
VARS-227ENST00000489979 TGM6O95932 706 aa12.66□□□□□ -0.38
VARS-227ENST00000489979 GBAP04062 536 aa12.66□□□□□ -0.38
VARS-227ENST00000489979 RHOXF2BP0C7M4 288 aa12.66□□□□□ -0.38
VARS-227ENST00000489979 STMN1P16949 149 aa12.66□□□□□ -0.38
VARS-227ENST00000489979 CHMP24386 653 aa12.66□□□□□ -0.38
VARS-227ENST00000489979 PTX3P26022 381 aaPredicted RBP12.66□□□□□ -0.38
VARS-227ENST00000489979 PIK3R1P27986 724 aa12.66□□□□□ -0.38
VARS-227ENST00000489979 CD79BP40259 229 aa12.66□□□□□ -0.38
VARS-227ENST00000489979 PTH2RP49190 550 aa12.66□□□□□ -0.38
VARS-227ENST00000489979 LHX2P50458 406 aa12.66□□□□□ -0.38
VARS-227ENST00000489979 GFRA1P56159 465 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms