RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 TRIP6Q15654 476 aaKnown RBP20.24■□□□□ 0.83
SMC4-221ENST00000489573 VWA2Q5GFL6 755 aa20.24■□□□□ 0.83
SMC4-221ENST00000489573 MFSD12Q6NUT3 480 aa20.24■□□□□ 0.83
SMC4-221ENST00000489573 RNF111Q6ZNA4 994 aa20.24■□□□□ 0.83
SMC4-221ENST00000489573 PQLC1Q8N2U9 271 aa20.24■□□□□ 0.83
SMC4-221ENST00000489573 C7orf57Q8NEG2 295 aa20.24■□□□□ 0.83
SMC4-221ENST00000489573 UGT2B28Q9BY64 529 aa20.24■□□□□ 0.83
SMC4-221ENST00000489573 TGIF2Q9GZN2 237 aa20.24■□□□□ 0.83
SMC4-221ENST00000489573 SLC39A1Q9NY26 324 aa20.24■□□□□ 0.83
SMC4-221ENST00000489573 CTSFQ9UBX1 484 aa20.24■□□□□ 0.83
SMC4-221ENST00000489573 SAMD4AQ9UPU9 718 aaKnown RBP20.24■□□□□ 0.83
SMC4-221ENST00000489573 LOXL2Q9Y4K0 774 aa20.24■□□□□ 0.83
SMC4-221ENST00000489573 OTOGLQ3ZCN5 2332 aa20.23■□□□□ 0.83
SMC4-221ENST00000489573 IGLV3-12A0A075B6K2 115 aa20.23■□□□□ 0.83
SMC4-221ENST00000489573 IGKV3D-11A0A0A0MRZ8 115 aa20.23■□□□□ 0.83
SMC4-221ENST00000489573 C5orf58C9J3I9 102 aa20.23■□□□□ 0.83
SMC4-221ENST00000489573 ASNA1O43681 348 aa20.23■□□□□ 0.83
SMC4-221ENST00000489573 ONECUT2O95948 504 aa20.23■□□□□ 0.83
SMC4-221ENST00000489573 IFNA16P05015 189 aa20.23■□□□□ 0.83
SMC4-221ENST00000489573 BCHEP06276 602 aa20.23■□□□□ 0.83
SMC4-221ENST00000489573 AQP1P29972 269 aa20.23■□□□□ 0.83
SMC4-221ENST00000489573 GALNSP34059 522 aa20.23■□□□□ 0.83
SMC4-221ENST00000489573 RORAP35398 523 aa20.23■□□□□ 0.83
SMC4-221ENST00000489573 RHAGQ02094 409 aa20.23■□□□□ 0.83
SMC4-221ENST00000489573 ISXQ2M1V0 245 aa20.23■□□□□ 0.83
SMC4-221ENST00000489573 FAM98BQ52LJ0 330 aaKnown RBP20.23■□□□□ 0.83
SMC4-221ENST00000489573 GLRX5Q86SX6 157 aa20.23■□□□□ 0.83
SMC4-221ENST00000489573 SLC38A5Q8WUX1 472 aa20.23■□□□□ 0.83
SMC4-221ENST00000489573 XAGE5Q8WWM1 108 aa20.23■□□□□ 0.83
SMC4-221ENST00000489573 OR7D2Q96RA2 312 aa20.23■□□□□ 0.83
SMC4-221ENST00000489573 ADAP2Q9NPF8 381 aa20.23■□□□□ 0.83
SMC4-221ENST00000489573 C6orf203Q9P0P8 240 aaPredicted RBP20.23■□□□□ 0.83
SMC4-221ENST00000489573 RPS6KA6Q9UK32 745 aa20.23■□□□□ 0.83
SMC4-221ENST00000489573 PIEZO1Q92508 2521 aa20.23■□□□□ 0.83
SMC4-221ENST00000489573 NUP210LQ5VU65 1888 aa20.22■□□□□ 0.83
SMC4-221ENST00000489573 COQ9O75208 318 aa20.22■□□□□ 0.83
SMC4-221ENST00000489573 TFPTP0C1Z6 253 aa20.22■□□□□ 0.83
SMC4-221ENST00000489573 MAN2A2P49641 1150 aa20.22■□□□□ 0.83
SMC4-221ENST00000489573 OCA2Q04671 838 aa20.22■□□□□ 0.83
SMC4-221ENST00000489573 MYBPC3Q14896 1274 aa20.22■□□□□ 0.83
SMC4-221ENST00000489573 REEP3Q6NUK4 255 aa20.22■□□□□ 0.83
SMC4-221ENST00000489573 CDC73Q6P1J9 531 aa20.22■□□□□ 0.83
SMC4-221ENST00000489573 ENPP6Q6UWR7 440 aa20.22■□□□□ 0.83
SMC4-221ENST00000489573 CCDC80Q76M96 950 aa20.22■□□□□ 0.83
SMC4-221ENST00000489573 GALNT10Q86SR1 603 aa20.22■□□□□ 0.83
SMC4-221ENST00000489573 METTL25Q8N6Q8 603 aa20.22■□□□□ 0.83
SMC4-221ENST00000489573 FAM86B1Q8N7N1 296 aa20.22■□□□□ 0.83
SMC4-221ENST00000489573 PAPD5Q8NDF8 572 aaKnown RBP20.22■□□□□ 0.83
SMC4-221ENST00000489573 SIMC1Q8NDZ2 872 aa20.22■□□□□ 0.83
SMC4-221ENST00000489573 FAM110BQ8TC76 370 aa20.22■□□□□ 0.83
SMC4-221ENST00000489573 TSLPQ969D9 159 aa20.22■□□□□ 0.83
SMC4-221ENST00000489573 OTUB1Q96FW1 271 aaPredicted RBP20.22■□□□□ 0.83
SMC4-221ENST00000489573 TMEM19Q96HH6 336 aa20.22■□□□□ 0.83
SMC4-221ENST00000489573 RNF145Q96MT1 663 aa20.22■□□□□ 0.83
SMC4-221ENST00000489573 SEPHS2Q99611 448 aa20.22■□□□□ 0.83
SMC4-221ENST00000489573 C14orf105Q9NVL8 296 aa20.22■□□□□ 0.83
SMC4-221ENST00000489573 ZNF639Q9UID6 485 aa20.22■□□□□ 0.83
SMC4-221ENST00000489573 SLC28A2O43868 658 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 CSO75390 466 aaKnown RBP20.21■□□□□ 0.83
SMC4-221ENST00000489573 GCM2O75603 506 aaPredicted RBP20.21■□□□□ 0.83
SMC4-221ENST00000489573 PRKD3O94806 890 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 MT-CO3P00414 261 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 PCBP3P57721 371 aaKnown RBP20.21■□□□□ 0.83
SMC4-221ENST00000489573 CHRNB3Q05901 458 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 EXOSC7Q15024 291 aaKnown RBP20.21■□□□□ 0.83
SMC4-221ENST00000489573 CBLL1Q75N03 491 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 SLC44A2Q8IWA5 706 aaPredicted RBP20.21■□□□□ 0.83
SMC4-221ENST00000489573 PRSS58Q8IYP2 241 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 STT3BQ8TCJ2 826 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 LIN37Q96GY3 246 aaPredicted RBP20.21■□□□□ 0.83
SMC4-221ENST00000489573 ZNF578Q96N58 590 aaPredicted RBP20.21■□□□□ 0.83
SMC4-221ENST00000489573 VN1R1Q9GZP7 353 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 ZNF451Q9Y4E5 1061 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 DUXAA6NLW8 204 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 MEN1O00255 615 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 HNRNPRO43390 633 aaKnown RBP20.21■□□□□ 0.83
SMC4-221ENST00000489573 ZNF682O95780 498 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 CBX7O95931 251 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 ZNF28P17035 718 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 CLCN2P51788 898 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 CLDN6P56747 220 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 RAB15P59190 212 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 GNA13Q14344 377 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 MAPK11Q15759 364 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 ZCCHC12Q6PEW1 402 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 DHRS13Q6UX07 377 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 EIF3MQ7L2H7 374 aaKnown RBP20.21■□□□□ 0.83
SMC4-221ENST00000489573 PACS2Q86VP3 889 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 LILRA2Q8N149 483 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 OR52R1Q8NGF1 315 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 ADAMTS15Q8TE58 950 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 PMEPA1Q969W9 287 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 SLC47A1Q96FL8 570 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 PYURFQ96I23 114 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 LRFN5Q96NI6 719 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 DEPDC7Q96QD5 511 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 PKP2Q99959 881 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 MAGIXQ9H6Y5 334 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 IFT80Q9P2H3 777 aaPredicted RBP20.21■□□□□ 0.83
SMC4-221ENST00000489573 RIMS3Q9UJD0 308 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms