RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 GOLM1Q8NBJ4 401 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 ECHDC3Q96DC8 303 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 RTP4Q96DX8 246 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 SLC30A3Q99726 388 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 LDAHQ9H6V9 325 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 ARMC1Q9NVT9 282 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 EEF1E1-BLOC1S5C9J1V9 151 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 PORP16435 677 aaPredicted RBP16.78■□□□□ 0.28
NPHP4-209ENST00000489180 AKR1C4P17516 323 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 SNTA1Q13424 505 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 BCL2L15Q5TBC7 163 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 NRMQ8IXM6 262 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 TEX26Q8N6G2 289 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 ELP5Q8TE02 316 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 SGTBQ96EQ0 304 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 CPNE2Q96FN4 548 aaPredicted RBP16.78■□□□□ 0.28
NPHP4-209ENST00000489180 MMP28Q9H239 520 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 NMNAT1Q9HAN9 279 aaPredicted RBP16.78■□□□□ 0.28
NPHP4-209ENST00000489180 BRF2Q9HAW0 419 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 PRODH2Q9UF12 536 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 PCDHGA2Q9Y5H1 932 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 FUOMA2VDF0 154 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 SLC22A31A6NKX4 558 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 KLK3P07288 261 aaPredicted RBP16.78■□□□□ 0.28
NPHP4-209ENST00000489180 DHRS4L1P0CG22 281 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 DRD5P21918 477 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 GALK2Q01415 458 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 ZNF542PQ5EBM4 170 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 RPL13AP3Q6NVV1 102 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 KLHDC7BQ96G42 594 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 CYP8B1Q9UNU6 501 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 CD70P32970 193 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 HMGCLP35914 325 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 RPS21P63220 83 aaKnown RBP16.77■□□□□ 0.28
NPHP4-209ENST00000489180 SIM1P81133 766 aaPredicted RBP16.77■□□□□ 0.28
NPHP4-209ENST00000489180 RGNQ15493 299 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 RTP2Q5QGT7 225 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 HES5Q5TA89 166 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 DCDC5Q6ZRR9 648 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 TMEM125Q96AQ2 219 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 CCDC32Q9BV29 185 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 POT1Q9NUX5 634 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 ASB6Q9NWX5 421 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 A0A1B0GV50 99 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 HOXA11P31270 313 aaPredicted RBP16.77■□□□□ 0.28
NPHP4-209ENST00000489180 UGT2B10P36537 528 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 CLCN2P51788 898 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 TAS2R38P59533 333 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 CDK5R2Q13319 367 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 MEX3DQ86XN8 651 aaKnown RBP16.77■□□□□ 0.28
NPHP4-209ENST00000489180 C12orf76Q8N812 135 aaPredicted RBP16.77■□□□□ 0.28
NPHP4-209ENST00000489180 OR4K5Q8NGD3 323 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 COQ3Q9NZJ6 369 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 MYH6P13533 1939 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 LSSP48449 732 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 PRMT2P55345 433 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 SNU13P55769 128 aaKnown RBP16.77■□□□□ 0.28
NPHP4-209ENST00000489180 COMMD6Q7Z4G1 85 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 BEST3Q8N1M1 668 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 MFSD8Q8NHS3 518 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 TRIB2Q92519 343 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 S100PBPQ96BU1 408 aa16.77■□□□□ 0.28
NPHP4-209ENST00000489180 EIF5A2Q9GZV4 153 aaKnown RBP16.77■□□□□ 0.28
NPHP4-209ENST00000489180 BCAS1O75363 584 aaPredicted RBP16.77■□□□□ 0.27
NPHP4-209ENST00000489180 IQCF3P0C7M6 154 aa16.77■□□□□ 0.27
NPHP4-209ENST00000489180 PIM1P11309 404 aaPredicted RBP16.77■□□□□ 0.27
NPHP4-209ENST00000489180 SOX3P41225 446 aa16.77■□□□□ 0.27
NPHP4-209ENST00000489180 MECP2P51608 486 aaKnown RBP16.77■□□□□ 0.27
NPHP4-209ENST00000489180 PLCXD2Q0VAA5 305 aa16.77■□□□□ 0.27
NPHP4-209ENST00000489180 TTC9BQ8N6N2 239 aa16.77■□□□□ 0.27
NPHP4-209ENST00000489180 OR52N2Q8NGI0 321 aa16.77■□□□□ 0.27
NPHP4-209ENST00000489180 MYEF2Q9P2K5 600 aaKnown RBP16.77■□□□□ 0.27
NPHP4-209ENST00000489180 A0A1B0GVG6 124 aa16.77■□□□□ 0.27
NPHP4-209ENST00000489180 GPR143P51810 404 aa16.77■□□□□ 0.27
NPHP4-209ENST00000489180 EGFL6Q8IUX8 553 aa16.77■□□□□ 0.27
NPHP4-209ENST00000489180 OR51L1Q8NGJ5 315 aa16.77■□□□□ 0.27
NPHP4-209ENST00000489180 TMEM40Q8WWA1 233 aa16.77■□□□□ 0.27
NPHP4-209ENST00000489180 THRSPQ92748 146 aa16.77■□□□□ 0.27
NPHP4-209ENST00000489180 SMARCD2Q92925 531 aa16.77■□□□□ 0.27
NPHP4-209ENST00000489180 TSACCQ96A04 125 aaPredicted RBP16.77■□□□□ 0.27
NPHP4-209ENST00000489180 CACNG6Q9BXT2 260 aa16.77■□□□□ 0.27
NPHP4-209ENST00000489180 KCNS2Q9ULS6 477 aa16.77■□□□□ 0.27
NPHP4-209ENST00000489180 RNGTTO60942 597 aaKnown RBP16.76■□□□□ 0.27
NPHP4-209ENST00000489180 PET100P0DJ07 73 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 C6P13671 934 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 AMY2BP19961 511 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 CRTC1Q6UUV9 634 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 FAIMQ9NVQ4 179 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 OR1A2Q9Y585 309 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 TCRBV21S2A2A0A5A6 115 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 M0R3H8 397 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 RAB3BP20337 219 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 PRDX3P30048 256 aaKnown RBP16.76■□□□□ 0.27
NPHP4-209ENST00000489180 DCTP40126 519 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 SLC26A5P58743 744 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 ACTA2P62736 377 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 ACTG2P63267 376 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 MICAQ29983 383 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 CMPK2Q5EBM0 449 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms