RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 ZNF155Q12901 538 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-232ENST00000489053 EXOSC7Q15024 291 aaKnown RBP8.41□□□□□ -1.06
HDAC6-232ENST00000489053 ZNHIT3Q15649 155 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-232ENST00000489053 NNATQ16517 81 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 ZNF791Q3KP31 576 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-232ENST00000489053 KRT71Q3SY84 523 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 CMPK2Q5EBM0 449 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 WLSQ5T9L3 541 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 ZNF787Q6DD87 383 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 ZNF585AQ6P3V2 769 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 TMEM64Q6YI46 380 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 Q6ZPB1 254 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-232ENST00000489053 ACAD11Q709F0 780 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 DOLPP1Q86YN1 238 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 C10orf107Q8IVU9 208 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 DDIASQ8IXT1 998 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 CCDC116Q8IYX3 515 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 PRR22Q8IZ63 422 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 TMEM251Q8N6I4 163 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 C17orf47Q8NEP4 570 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 OR52R1Q8NGF1 315 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 OR52N2Q8NGI0 321 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 OR10Q1Q8NGQ4 319 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 FAM76AQ8TAV0 307 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 PAQR8Q8TEZ7 354 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 C16orf78Q8WTQ4 265 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 MZB1Q8WU39 189 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 ASB5Q8WWX0 329 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 UCN3Q969E3 161 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 MARVELD3Q96A59 401 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 SDCCAG3Q96C92 435 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 ERP27Q96DN0 273 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 APIPQ96GX9 242 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 LCORQ96JN0 433 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-232ENST00000489053 ZFP64Q9NPA5 681 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 TUBA8Q9NY65 449 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-232ENST00000489053 KLRF1Q9NZS2 232 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 ZNF225Q9UK10 706 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 EMCNQ9ULC0 261 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 ZNF835Q9Y2P0 537 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 WBP11Q9Y2W2 641 aaKnown RBP8.41□□□□□ -1.06
HDAC6-232ENST00000489053 OR10H1Q9Y4A9 318 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 LRBAP50851 2863 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 C15orf38-AP3S2A0A0A6YYH1 394 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 TRGV5A0A0B4J1U4 118 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 PINLYPA6NC86 204 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 FAM47E-STBD1D6RA91 191 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 AZIN1O14977 448 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 RGS16O15492 202 aaPredicted RBP8.4□□□□□ -1.06
HDAC6-232ENST00000489053 ZNHIT1O43257 154 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 HCN1O60741 890 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 COQ9O75208 318 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 SPAG7O75391 227 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 REM1O75628 298 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 PPM1BO75688 479 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 CLDN14O95500 239 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 TUBBP07437 444 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 CT62P0C5K7 136 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 CHN1P15882 459 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 PCSK2P16519 638 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 DDCP20711 480 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 ABCD3P28288 659 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 MAPK1P28482 360 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 GPC1P35052 558 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 NCBP2P52298 156 aaKnown RBP eCLIP8.4□□□□□ -1.06
HDAC6-232ENST00000489053 FBXW4P57775 412 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 MRPS35P82673 323 aaKnown RBP8.4□□□□□ -1.06
HDAC6-232ENST00000489053 SLC18A2Q05940 514 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 MAP4K2Q12851 820 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 SF3B4Q15427 424 aaKnown RBP eCLIP8.4□□□□□ -1.062e-9■■■■■ 45.3
HDAC6-232ENST00000489053 NTRK2Q16620 822 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 SP5Q6BEB4 398 aaPredicted RBP8.4□□□□□ -1.06
HDAC6-232ENST00000489053 CLEC6AQ6EIG7 209 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 FAM180BQ6P0A1 224 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 FAM111BQ6SJ93 734 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 IKBIPQ70UQ0 350 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 SZRD1Q7Z422 152 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 MMP21Q8N119 569 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 OR5M9Q8NGP3 310 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 OR9A2Q8NGT5 310 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 PHF10Q8WUB8 498 aaKnown RBP8.4□□□□□ -1.06
HDAC6-232ENST00000489053 ITLN2Q8WWU7 325 aaPredicted RBP8.4□□□□□ -1.06
HDAC6-232ENST00000489053 RND1Q92730 232 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 KAT2AQ92830 837 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 TMCO6Q96DC7 493 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 HSPBAP1Q96EW2 488 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 RILPQ96NA2 401 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 FAM111AQ96PZ2 611 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 SECISBP2Q96T21 854 aaKnown RBP8.4□□□□□ -1.06
HDAC6-232ENST00000489053 ITPAQ9BY32 194 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 STMN4Q9H169 189 aaPredicted RBP8.4□□□□□ -1.06
HDAC6-232ENST00000489053 ZDHHC11Q9H8X9 412 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 LRTM1Q9HBL6 345 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 SLC35C2Q9NQQ7 365 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 DDX18Q9NVP1 670 aaKnown RBP8.4□□□□□ -1.06
HDAC6-232ENST00000489053 C1orf109Q9NX04 203 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 TAS2R9Q9NYW1 312 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 MAT2BQ9NZL9 334 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 EHD3Q9NZN3 535 aa8.4□□□□□ -1.06
HDAC6-232ENST00000489053 PLLPQ9Y342 182 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms