RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 CCDC71Q8IV32 467 aaPredicted RBP21.12■□□□□ 0.97
COL9A3-213ENST00000489045 ZNF295-AS1Q8N0V1 137 aa21.12■□□□□ 0.97
COL9A3-213ENST00000489045 CNPY4Q8N129 248 aa21.12■□□□□ 0.97
COL9A3-213ENST00000489045 C17orf47Q8NEP4 570 aa21.12■□□□□ 0.97
COL9A3-213ENST00000489045 ADCY4Q8NFM4 1077 aa21.12■□□□□ 0.97
COL9A3-213ENST00000489045 SPPL2AQ8TCT8 520 aa21.12■□□□□ 0.97
COL9A3-213ENST00000489045 SARAFQ96BY9 339 aa21.12■□□□□ 0.97
COL9A3-213ENST00000489045 CNRIP1Q96F85 164 aaPredicted RBP21.12■□□□□ 0.97
COL9A3-213ENST00000489045 ZNF597Q96LX8 424 aa21.12■□□□□ 0.97
COL9A3-213ENST00000489045 NXF5Q9H1B4 397 aaKnown RBP21.12■□□□□ 0.97
COL9A3-213ENST00000489045 GSTO2Q9H4Y5 243 aa21.12■□□□□ 0.97
COL9A3-213ENST00000489045 QPCTLQ9NXS2 382 aa21.12■□□□□ 0.97
COL9A3-213ENST00000489045 SPRR3Q9UBC9 169 aa21.12■□□□□ 0.97
COL9A3-213ENST00000489045 HEY2Q9UBP5 337 aa21.12■□□□□ 0.97
COL9A3-213ENST00000489045 B4GALT7Q9UBV7 327 aa21.12■□□□□ 0.97
COL9A3-213ENST00000489045 DCDC2Q9UHG0 476 aa21.12■□□□□ 0.97
COL9A3-213ENST00000489045 BCAP29Q9UHQ4 241 aa21.12■□□□□ 0.97
COL9A3-213ENST00000489045 FAM215AQ9Y5M1 114 aa21.12■□□□□ 0.97
COL9A3-213ENST00000489045 INTS1Q8N201 2190 aaKnown RBP21.12■□□□□ 0.97
COL9A3-213ENST00000489045 ANKRD33BA6NCL7 494 aa21.11■□□□□ 0.97
COL9A3-213ENST00000489045 FAM90A27PA6NNH2 459 aa21.11■□□□□ 0.97
COL9A3-213ENST00000489045 PCDH7O60245 1069 aa21.11■□□□□ 0.97
COL9A3-213ENST00000489045 TRIM3O75382 744 aaPredicted RBP21.11■□□□□ 0.97
COL9A3-213ENST00000489045 SHBGP04278 402 aa21.11■□□□□ 0.97
COL9A3-213ENST00000489045 ENO1P06733 434 aaKnown RBP21.11■□□□□ 0.97
COL9A3-213ENST00000489045 RAE1P78406 368 aaKnown RBP21.11■□□□□ 0.97
COL9A3-213ENST00000489045 HMGCS1Q01581 520 aa21.11■□□□□ 0.97
COL9A3-213ENST00000489045 DUSP8Q13202 625 aa21.11■□□□□ 0.97
COL9A3-213ENST00000489045 LTB4RQ15722 352 aa21.11■□□□□ 0.97
COL9A3-213ENST00000489045 NNATQ16517 81 aa21.11■□□□□ 0.97
COL9A3-213ENST00000489045 WLSQ5T9L3 541 aa21.11■□□□□ 0.97
COL9A3-213ENST00000489045 RTL6Q6ICC9 239 aa21.11■□□□□ 0.97
COL9A3-213ENST00000489045 GBP7Q8N8V2 638 aaPredicted RBP21.11■□□□□ 0.97
COL9A3-213ENST00000489045 SIMC1Q8NDZ2 872 aa21.11■□□□□ 0.97
COL9A3-213ENST00000489045 LILRB4Q8NHJ6 448 aa21.11■□□□□ 0.97
COL9A3-213ENST00000489045 ZNF681Q96N22 645 aa21.11■□□□□ 0.97
COL9A3-213ENST00000489045 RILPQ96NA2 401 aa21.11■□□□□ 0.97
COL9A3-213ENST00000489045 KCNA7Q96RP8 456 aa21.11■□□□□ 0.97
COL9A3-213ENST00000489045 SPOCK3Q9BQ16 436 aa21.11■□□□□ 0.97
COL9A3-213ENST00000489045 ITPAQ9BY32 194 aa21.11■□□□□ 0.97
COL9A3-213ENST00000489045 ENKD1Q9H0I2 346 aa21.11■□□□□ 0.97
COL9A3-213ENST00000489045 SLC6A15Q9H2J7 730 aa21.11■□□□□ 0.97
COL9A3-213ENST00000489045 ZNF639Q9UID6 485 aa21.11■□□□□ 0.97
COL9A3-213ENST00000489045 UTS2RQ9UKP6 389 aa21.11■□□□□ 0.97
COL9A3-213ENST00000489045 TIMM22Q9Y584 194 aa21.11■□□□□ 0.97
COL9A3-213ENST00000489045 ZNF780BQ9Y6R6 833 aa21.11■□□□□ 0.97
COL9A3-213ENST00000489045 NKX2-6A6NCS4 301 aa21.1■□□□□ 0.97
COL9A3-213ENST00000489045 GLRA3O75311 464 aa21.1■□□□□ 0.97
COL9A3-213ENST00000489045 CBX7O95931 251 aa21.1■□□□□ 0.97
COL9A3-213ENST00000489045 IL3P08700 152 aa21.1■□□□□ 0.97
COL9A3-213ENST00000489045 GDF1P27539 372 aa21.1■□□□□ 0.97
COL9A3-213ENST00000489045 ABCD3P28288 659 aa21.1■□□□□ 0.97
COL9A3-213ENST00000489045 SOX18P35713 384 aa21.1■□□□□ 0.97
COL9A3-213ENST00000489045 TRPC1P48995 793 aa21.1■□□□□ 0.97
COL9A3-213ENST00000489045 SPIN4Q56A73 249 aa21.1■□□□□ 0.97
COL9A3-213ENST00000489045 TMEM198Q66K66 360 aa21.1■□□□□ 0.97
COL9A3-213ENST00000489045 B3GNT6Q6ZMB0 384 aa21.1■□□□□ 0.97
COL9A3-213ENST00000489045 MEX3BQ6ZN04 569 aaKnown RBP21.1■□□□□ 0.97
COL9A3-213ENST00000489045 CCNYL1Q8N7R7 359 aa21.1■□□□□ 0.97
COL9A3-213ENST00000489045 ACBD4Q8NC06 268 aa21.1■□□□□ 0.97
COL9A3-213ENST00000489045 UBLCP1Q8WVY7 318 aaPredicted RBP21.1■□□□□ 0.97
COL9A3-213ENST00000489045 APIPQ96GX9 242 aa21.1■□□□□ 0.97
COL9A3-213ENST00000489045 SECISBP2Q96T21 854 aaKnown RBP21.1■□□□□ 0.97
COL9A3-213ENST00000489045 TTYH2Q9BSA4 534 aa21.1■□□□□ 0.97
COL9A3-213ENST00000489045 UCK2Q9BZX2 261 aa21.1■□□□□ 0.97
COL9A3-213ENST00000489045 ACKR4Q9NPB9 350 aa21.1■□□□□ 0.97
COL9A3-213ENST00000489045 CFL2Q9Y281 166 aa21.1■□□□□ 0.97
COL9A3-213ENST00000489045 DLGAP4Q9Y2H0 992 aa21.1■□□□□ 0.97
COL9A3-213ENST00000489045 GNG14A0A1W2PPG7 69 aa21.09■□□□□ 0.97
COL9A3-213ENST00000489045 G3V2L1 256 aa21.09■□□□□ 0.97
COL9A3-213ENST00000489045 WDR1O75083 606 aa21.09■□□□□ 0.97
COL9A3-213ENST00000489045 GLI4P10075 376 aa21.09■□□□□ 0.97
COL9A3-213ENST00000489045 MYL2P10916 166 aa21.09■□□□□ 0.97
COL9A3-213ENST00000489045 KRT15P19012 456 aa21.09■□□□□ 0.97
COL9A3-213ENST00000489045 SLCO1A2P46721 670 aa21.09■□□□□ 0.97
COL9A3-213ENST00000489045 ACSM2AQ08AH3 577 aa21.09■□□□□ 0.97
COL9A3-213ENST00000489045 TRMT12Q53H54 448 aaKnown RBP21.09■□□□□ 0.97
COL9A3-213ENST00000489045 ACSM2BQ68CK6 577 aa21.09■□□□□ 0.97
COL9A3-213ENST00000489045 SCIMPQ6UWF3 145 aa21.09■□□□□ 0.97
COL9A3-213ENST00000489045 ZYG11AQ6WRX3 759 aa21.09■□□□□ 0.97
COL9A3-213ENST00000489045 EIF1ADQ8N9N8 165 aaKnown RBP21.09■□□□□ 0.97
COL9A3-213ENST00000489045 OR52R1Q8NGF1 315 aa21.09■□□□□ 0.97
COL9A3-213ENST00000489045 OR10Q1Q8NGQ4 319 aa21.09■□□□□ 0.97
COL9A3-213ENST00000489045 NEIL3Q8TAT5 605 aa21.09■□□□□ 0.97
COL9A3-213ENST00000489045 CTHRC1Q96CG8 243 aa21.09■□□□□ 0.97
COL9A3-213ENST00000489045 CCDC126Q96EE4 140 aa21.09■□□□□ 0.97
COL9A3-213ENST00000489045 ANGPTL4Q9BY76 406 aa21.09■□□□□ 0.97
COL9A3-213ENST00000489045 MID1IP1Q9NPA3 183 aa21.09■□□□□ 0.97
COL9A3-213ENST00000489045 PFDN4Q9NQP4 134 aa21.09■□□□□ 0.97
COL9A3-213ENST00000489045 PLLPQ9Y342 182 aa21.09■□□□□ 0.97
COL9A3-213ENST00000489045 POLQO75417 2590 aa21.09■□□□□ 0.97
COL9A3-213ENST00000489045 CCDC151A5D8V7 595 aa21.08■□□□□ 0.97
COL9A3-213ENST00000489045 UBFD1O14562 309 aaKnown RBP21.08■□□□□ 0.97
COL9A3-213ENST00000489045 PPM1BO75688 479 aa21.08■□□□□ 0.97
COL9A3-213ENST00000489045 PROCP04070 461 aa21.08■□□□□ 0.97
COL9A3-213ENST00000489045 DRD2P14416 443 aa21.08■□□□□ 0.97
COL9A3-213ENST00000489045 PCSK2P16519 638 aa21.08■□□□□ 0.97
COL9A3-213ENST00000489045 TIA1P31483 386 aaKnown RBP eCLIP21.08■□□□□ 0.97
COL9A3-213ENST00000489045 CASP3P42574 277 aa21.08■□□□□ 0.97
COL9A3-213ENST00000489045 MASP1P48740 699 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms