RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 GBAP04062 536 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 ABCB1P08183 1280 aaPredicted RBP17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 MTHFD2P13995 350 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 CPN1P15169 458 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 KRT15P19012 456 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 PHEXP78562 749 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 CUL3Q13618 768 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 LIPJQ5W064 366 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 DESI1Q6ICB0 168 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 PLXDC2Q6UX71 529 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 ADGRE4PQ86SQ3 457 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 NUDT13Q86X67 352 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 CIARTQ8N365 385 aaPredicted RBP17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 C17orf47Q8NEP4 570 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 ZNF592Q92610 1267 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 INTS12Q96CB8 462 aaKnown RBP17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 TM9SF2Q99805 663 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 NXF5Q9H1B4 397 aaKnown RBP17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 ACTR8Q9H981 624 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 NMRAL1Q9HBL8 299 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 RNF14Q9UBS8 474 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 DTX4Q9Y2E6 619 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 SNX24Q9Y343 169 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 ANGPTL3Q9Y5C1 460 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 SAR1BQ9Y6B6 198 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 KIAA1324LA8MWY0 1029 aaPredicted RBP17.69■□□□□ 0.42
SMPDL3A-202ENST00000487215 H0Y3Z8 333 aa17.69■□□□□ 0.42
SMPDL3A-202ENST00000487215 CASKO14936 926 aa17.69■□□□□ 0.42
SMPDL3A-202ENST00000487215 SNPHO15079 494 aa17.69■□□□□ 0.42
SMPDL3A-202ENST00000487215 CDH16O75309 829 aa17.69■□□□□ 0.42
SMPDL3A-202ENST00000487215 PPM1BO75688 479 aa17.69■□□□□ 0.42
SMPDL3A-202ENST00000487215 GPX3P22352 226 aa17.69■□□□□ 0.42
SMPDL3A-202ENST00000487215 PIK3R1P27986 724 aa17.69■□□□□ 0.42
SMPDL3A-202ENST00000487215 GCKP35557 465 aa17.69■□□□□ 0.42
SMPDL3A-202ENST00000487215 PTGDSP41222 190 aa17.69■□□□□ 0.42
SMPDL3A-202ENST00000487215 NNATQ16517 81 aa17.69■□□□□ 0.42
SMPDL3A-202ENST00000487215 RAPH1Q70E73 1250 aa17.69■□□□□ 0.42
SMPDL3A-202ENST00000487215 CREG2Q8IUH2 290 aa17.69■□□□□ 0.42
SMPDL3A-202ENST00000487215 P3H2Q8IVL5 708 aa17.69■□□□□ 0.42
SMPDL3A-202ENST00000487215 GCNT2Q8N0V5 402 aa17.69■□□□□ 0.42
SMPDL3A-202ENST00000487215 HGDQ93099 445 aa17.69■□□□□ 0.42
SMPDL3A-202ENST00000487215 REPS1Q96D71 796 aa17.69■□□□□ 0.42
SMPDL3A-202ENST00000487215 NODALQ96S42 347 aa17.69■□□□□ 0.42
SMPDL3A-202ENST00000487215 MDFIQ99750 246 aa17.69■□□□□ 0.42
SMPDL3A-202ENST00000487215 GRPEL1Q9HAV7 217 aa17.69■□□□□ 0.42
SMPDL3A-202ENST00000487215 SAYSD1Q9NPB0 183 aa17.69■□□□□ 0.42
SMPDL3A-202ENST00000487215 EIF3LQ9Y262 564 aaKnown RBP17.69■□□□□ 0.42
SMPDL3A-202ENST00000487215 TESMINQ9Y4I5 508 aa17.69■□□□□ 0.42
SMPDL3A-202ENST00000487215 EXPH5Q8NEV8 1989 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 C2orf72A6NCS6 295 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 H7C1Q1 480 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 SMPD2O60906 423 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 LTA4HP09960 611 aaKnown RBP17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 NAGAP17050 411 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 NT5EP21589 574 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 SPRP35270 261 aaPredicted RBP17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 NEK2P51955 445 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 GNG11P61952 73 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 SRYQ05066 204 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 SLMAPQ14BN4 828 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 CPSF6Q16630 551 aaKnown RBP eCLIP17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 SLC30A6Q6NXT4 461 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 TMEM81Q6P7N7 255 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 TBC1D1Q86TI0 1168 aaPredicted RBP17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 LRRC75A-AS1Q8N1F1 130 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 OR7G1Q8NGA0 311 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 OR4K14Q8NGD5 310 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 WDR20Q8TBZ3 569 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 WNT2BQ93097 391 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 UCN2Q96RP3 112 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 NAPGQ99747 312 aaPredicted RBP17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 PIP5K1AQ99755 562 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 G6PC3Q9BUM1 346 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 OSBPL11Q9BXB4 747 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 OR2B2Q9GZK3 357 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 PIGMQ9H3S5 423 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 GALNT9Q9HCQ5 603 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 SERHLQ9NQF3 203 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 CLCF1Q9UBD9 225 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 MAPRE3Q9UPY8 281 aa17.68■□□□□ 0.42
SMPDL3A-202ENST00000487215 LRRC14BA6NHZ5 514 aa17.67■□□□□ 0.42
SMPDL3A-202ENST00000487215 A8MXE2 369 aa17.67■□□□□ 0.42
SMPDL3A-202ENST00000487215 UGDHO60701 494 aa17.67■□□□□ 0.42
SMPDL3A-202ENST00000487215 ICOSLGO75144 302 aa17.67■□□□□ 0.42
SMPDL3A-202ENST00000487215 RHOXF2BP0C7M4 288 aa17.67■□□□□ 0.42
SMPDL3A-202ENST00000487215 S1PR1P21453 382 aa17.67■□□□□ 0.42
SMPDL3A-202ENST00000487215 PCSK6P29122 969 aa17.67■□□□□ 0.42
SMPDL3A-202ENST00000487215 XKP51811 444 aa17.67■□□□□ 0.42
SMPDL3A-202ENST00000487215 GRTP1Q5TC63 336 aa17.67■□□□□ 0.42
SMPDL3A-202ENST00000487215 C6orf163Q5TEZ5 329 aa17.67■□□□□ 0.42
SMPDL3A-202ENST00000487215 ENPP6Q6UWR7 440 aa17.67■□□□□ 0.42
SMPDL3A-202ENST00000487215 CYS1Q717R9 158 aa17.67■□□□□ 0.42
SMPDL3A-202ENST00000487215 NUP54Q7Z3B4 507 aa17.67■□□□□ 0.42
SMPDL3A-202ENST00000487215 CTAGE3PQ8IX95 158 aa17.67■□□□□ 0.42
SMPDL3A-202ENST00000487215 OR14L1PQ8NHC6 308 aa17.67■□□□□ 0.42
SMPDL3A-202ENST00000487215 ANP32BQ92688 251 aaKnown RBP17.67■□□□□ 0.42
SMPDL3A-202ENST00000487215 NXNL1Q96CM4 212 aa17.67■□□□□ 0.42
SMPDL3A-202ENST00000487215 Q96MF0 132 aa17.67■□□□□ 0.42
SMPDL3A-202ENST00000487215 ITPAQ9BY32 194 aa17.67■□□□□ 0.42
SMPDL3A-202ENST00000487215 ACBD3Q9H3P7 528 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms