RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 MIPOL1Q8TD10 442 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 NCLNQ969V3 563 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 C16orf45Q96MC5 204 aaPredicted RBP3.73□□□□□ -1.81
SMC4-218ENST00000486711 TSPAN18Q96SJ8 248 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 PSMB7Q99436 277 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 HSD17B14Q9BPX1 270 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 C19orf43Q9BQ61 176 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 CABLES2Q9BTV7 478 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 NDUFAF3Q9BU61 184 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 RBM24Q9BX46 236 aaKnown RBP3.73□□□□□ -1.81
SMC4-218ENST00000486711 ERVK-6Q9BXR3 956 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 LRRCC1Q9C099 1032 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 DPH5Q9H2P9 285 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 JPT2Q9H910 190 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 ROPN1Q9HAT0 212 aaPredicted RBP3.73□□□□□ -1.81
SMC4-218ENST00000486711 POLE3Q9NRF9 147 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 TAS2R16Q9NYV7 291 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.73□□□□□ -1.81
SMC4-218ENST00000486711 FBXO7Q9Y3I1 522 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 CPQQ9Y646 472 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 FKBP7Q9Y680 259 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 ATP8B3O60423 1300 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 ZMYM6O95789 1325 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 FAM205AQ6ZU69 1335 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 IGHV3OR16-10A0A075B7F0 116 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 NPIPA5A0A0B4J1W7 369 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 NPIPA5E9PKD4 350 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 K7EQG2 157 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 K7ERI5 159 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 CYB561D2O14569 222 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 FRAT2O75474 233 aaPredicted RBP3.72□□□□□ -1.81
SMC4-218ENST00000486711 IGHG1P01857 330 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 FCGR3AP08637 254 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 FOSL2P15408 326 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 POLR2FP61218 127 aaKnown RBP3.72□□□□□ -1.81
SMC4-218ENST00000486711 ACY1Q03154 408 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 BNIP1Q12981 228 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 CEBPEQ15744 281 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 PARP6Q2NL67 630 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 ZNF528Q3MIS6 628 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 MOB2Q70IA6 237 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 TMUB2Q71RG4 321 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 P4HA3Q7Z4N8 544 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 RPAINQ86UA6 219 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 AMZ2Q86W34 360 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 SPAG16Q8N0X2 631 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 SSC4DQ8WTU2 575 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 PINX1Q96BK5 328 aaKnown RBP3.72□□□□□ -1.81
SMC4-218ENST00000486711 ZNF689Q96CS4 500 aaPredicted RBP3.72□□□□□ -1.81
SMC4-218ENST00000486711 MRPL38Q96DV4 380 aaKnown RBP3.72□□□□□ -1.81
SMC4-218ENST00000486711 RBM18Q96H35 190 aaKnown RBP3.72□□□□□ -1.81
SMC4-218ENST00000486711 CPXM1Q96SM3 734 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 WRAP53Q9BUR4 548 aaKnown RBP3.72□□□□□ -1.81
SMC4-218ENST00000486711 RAB11FIP5Q9BXF6 653 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 PNNQ9H307 717 aaKnown RBP3.72□□□□□ -1.81
SMC4-218ENST00000486711 VAT1LQ9HCJ6 419 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 CTSZQ9UBR2 303 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 RAD54L2Q9Y4B4 1467 aa3.72□□□□□ -1.81
SMC4-218ENST00000486711 PTPRUQ92729 1446 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 A0A0A6YYD4 124 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 A0A0J9YVX5 310 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 FAM230AA0A1W2PPH8 454 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 RGSL1A5PLK6 1076 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 E9PQ18 207 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 SCGB2A1O75556 95 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 STK17BO94768 372 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 RRASP10301 218 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 LMO2P25791 158 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 SGSHP51688 502 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 PRKCEQ02156 737 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 SRYQ05066 204 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 SCGB2A2Q13296 93 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 RAPSNQ13702 412 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 SIX1Q15475 284 aaPredicted RBP3.71□□□□□ -1.82
SMC4-218ENST00000486711 REP15Q6BDI9 236 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 ZCCHC12Q6PEW1 402 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 ARSKQ6UWY0 536 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 MISPQ8IVT2 679 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 ZNF440Q8IYI8 595 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 CERS5Q8N5B7 392 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 MINDY2Q8NBR6 621 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 ZNF397Q8NF99 534 aaPredicted RBP3.71□□□□□ -1.82
SMC4-218ENST00000486711 WDR36Q8NI36 951 aaKnown RBP3.71□□□□□ -1.82
SMC4-218ENST00000486711 VGLL1Q99990 258 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 RBM4BQ9BQ04 359 aaKnown RBP3.71□□□□□ -1.82
SMC4-218ENST00000486711 HEXA-AS1Q9H8Q6 139 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 NRN1Q9NPD7 142 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 ANKMY1Q9P2S6 941 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 IKZF3Q9UKT9 509 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 EMCNQ9ULC0 261 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 MGAT4BQ9UQ53 548 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 KIF3AQ9Y496 699 aa3.71□□□□□ -1.82
SMC4-218ENST00000486711 TEX48A0A1B0GUV7 120 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 ADAM12O43184 909 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 TOM1L1O75674 476 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 NUDT14O95848 222 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 ZCCHC18P0CG32 403 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 UCP1P25874 307 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 PTPN6P29350 595 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 MAT2AP31153 395 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms