RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 XKRXQ6PP77 449 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 FBXW8Q8N3Y1 598 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 OR9A2Q8NGT5 310 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 ADIPOR1Q96A54 375 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 TP53INP1Q96A56 240 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 SDCCAG3Q96C92 435 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 FAM111AQ96PZ2 611 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 SMC6Q96SB8 1091 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 NXF5Q9H1B4 397 aaKnown RBP16.24■□□□□ 0.19
COL6A1-204ENST00000486023 RRAGDQ9NQL2 400 aaPredicted RBP16.24■□□□□ 0.19
COL6A1-204ENST00000486023 CNIH4Q9P003 139 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 SENP1Q9P0U3 644 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 MID2Q9UJV3 735 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 ACAD8Q9UKU7 415 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 BOKQ9UMX3 212 aaPredicted RBP16.24■□□□□ 0.19
COL6A1-204ENST00000486023 CFL2Q9Y281 166 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 PLLPQ9Y342 182 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 PTGDR2Q9Y5Y4 395 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 CHCHD2Q9Y6H1 151 aaPredicted RBP16.24■□□□□ 0.19
COL6A1-204ENST00000486023 NOTCH2Q04721 2471 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 E9PLN8 166 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 TRIM13O60858 407 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 SEC22BO75396 215 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 TRAPPC6AO75865 159 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 RFPL3SP0C7P2 107 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 UROSP10746 265 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 TRPC1P48995 793 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 MAN2A2P49641 1150 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 NAA20P61599 178 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 PCLAFQ15004 111 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 RPS6KA2Q15349 733 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 TOMM20Q15388 145 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 CDSNQ15517 529 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 ERCC6LQ2NKX8 1250 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 GXYLT1Q4G148 440 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 TMEM198Q66K66 360 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 DESI1Q6ICB0 168 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 DND1Q8IYX4 353 aaKnown RBP16.23■□□□□ 0.19
COL6A1-204ENST00000486023 EID3Q8N140 333 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 ZNF441Q8N8Z8 693 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 AENQ8WTP8 325 aaKnown RBP16.23■□□□□ 0.19
COL6A1-204ENST00000486023 APOPT1Q96IL0 206 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 ZNF681Q96N22 645 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 VKORC1Q9BQB6 163 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 MECRQ9BV79 373 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 GATA5Q9BWX5 397 aaPredicted RBP16.23■□□□□ 0.19
COL6A1-204ENST00000486023 ZDHHC11Q9H8X9 412 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 PROK2Q9HC23 129 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 SH2D2AQ9NP31 389 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 ZFP64Q9NPA5 681 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 SLC35C2Q9NQQ7 365 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 PNPLA3Q9NST1 481 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 SLC17A7Q9P2U7 560 aa16.23■□□□□ 0.19
COL6A1-204ENST00000486023 CRYBG3Q68DQ2 2970 aa16.22■□□□□ 0.19
COL6A1-204ENST00000486023 C2orf72A6NCS6 295 aa16.22■□□□□ 0.19
COL6A1-204ENST00000486023 ADAM10O14672 748 aa16.22■□□□□ 0.19
COL6A1-204ENST00000486023 CBX7O95931 251 aa16.22■□□□□ 0.19
COL6A1-204ENST00000486023 NUDT17P0C025 328 aa16.22■□□□□ 0.19
COL6A1-204ENST00000486023 ABCD3P28288 659 aa16.22■□□□□ 0.19
COL6A1-204ENST00000486023 ALDH3A1P30838 453 aa16.22■□□□□ 0.19
COL6A1-204ENST00000486023 MASP1P48740 699 aa16.22■□□□□ 0.19
COL6A1-204ENST00000486023 TMED10P49755 219 aaKnown RBP16.22■□□□□ 0.19
COL6A1-204ENST00000486023 DUSP8Q13202 625 aa16.22■□□□□ 0.19
COL6A1-204ENST00000486023 EMBQ6PCB8 327 aa16.22■□□□□ 0.19
COL6A1-204ENST00000486023 TRILQ7L0X0 811 aa16.22■□□□□ 0.19
COL6A1-204ENST00000486023 TRABD2AQ86V40 505 aa16.22■□□□□ 0.19
COL6A1-204ENST00000486023 TICAM1Q8IUC6 712 aa16.22■□□□□ 0.19
COL6A1-204ENST00000486023 RPRMLQ8N4K4 120 aa16.22■□□□□ 0.19
COL6A1-204ENST00000486023 BANPQ8N9N5 519 aa16.22■□□□□ 0.19
COL6A1-204ENST00000486023 AGR3Q8TD06 166 aa16.22■□□□□ 0.19
COL6A1-204ENST00000486023 GFM2Q969S9 779 aaKnown RBP16.22■□□□□ 0.19
COL6A1-204ENST00000486023 MARVELD3Q96A59 401 aa16.22■□□□□ 0.19
COL6A1-204ENST00000486023 MIEF1Q9NQG6 463 aa16.22■□□□□ 0.19
COL6A1-204ENST00000486023 COQ3Q9NZJ6 369 aa16.22■□□□□ 0.19
COL6A1-204ENST00000486023 CNOT11Q9UKZ1 510 aaKnown RBP16.22■□□□□ 0.19
COL6A1-204ENST00000486023 CELSR2Q9HCU4 2923 aa16.22■□□□□ 0.19
COL6A1-204ENST00000486023 TRGV5A0A0B4J1U4 118 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 H3BQF6 201 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 GNB5O14775 395 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 AZIN1O14977 448 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 JUNP05412 331 aaKnown RBP16.21■□□□□ 0.19
COL6A1-204ENST00000486023 LINC00032P0C843 101 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 GDF1P27539 372 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 MPIP34949 423 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 ZNF763Q0D2J5 394 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 PLCXD2Q0VAA5 305 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 PMPCAQ10713 525 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 NOXRED1Q6NXP6 359 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 TRIM46Q7Z4K8 759 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 RIBC1Q8N443 379 aaPredicted RBP16.21■□□□□ 0.19
COL6A1-204ENST00000486023 LIX1Q8N485 282 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 OR10Q1Q8NGQ4 319 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 SPPL2AQ8TCT8 520 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 TCP10LQ8TDR4 215 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 CA5BP1Q8WTZ4 195 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 LCORQ96JN0 433 aaPredicted RBP16.21■□□□□ 0.19
COL6A1-204ENST00000486023 RILPQ96NA2 401 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 GNRHR2Q96P88 292 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 PARD6BQ9BYG5 372 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 ROPN1BQ9BZX4 212 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms