RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 CABS1Q96KC9 395 aa2.29□□□□□ -2.04
GCFC2-209ENST00000486016 KIR2DL4Q99706 377 aa2.29□□□□□ -2.04
GCFC2-209ENST00000486016 TNMDQ9H2S6 317 aa2.29□□□□□ -2.04
GCFC2-209ENST00000486016 KLK12Q9UKR0 248 aa2.29□□□□□ -2.04
GCFC2-209ENST00000486016 FBXW2Q9UKT8 454 aa2.29□□□□□ -2.04
GCFC2-209ENST00000486016 GTF3C1Q12789 2109 aa2.29□□□□□ -2.04
GCFC2-209ENST00000486016 CHD4Q14839 1912 aa2.29□□□□□ -2.04
GCFC2-209ENST00000486016 LATO43561 262 aa2.28□□□□□ -2.04
GCFC2-209ENST00000486016 NUDT21O43809 227 aaKnown RBP2.28□□□□□ -2.04
GCFC2-209ENST00000486016 LRP3O75074 770 aa2.28□□□□□ -2.04
GCFC2-209ENST00000486016 HMOX1P09601 288 aa2.28□□□□□ -2.04
GCFC2-209ENST00000486016 MTIF2P46199 727 aaKnown RBP2.28□□□□□ -2.04
GCFC2-209ENST00000486016 LINC00315P59091 139 aa2.28□□□□□ -2.04
GCFC2-209ENST00000486016 SLC3A1Q07837 685 aa2.28□□□□□ -2.04
GCFC2-209ENST00000486016 ACTN3Q08043 901 aaPredicted RBP2.28□□□□□ -2.04
GCFC2-209ENST00000486016 TEFQ10587 303 aa2.28□□□□□ -2.04
GCFC2-209ENST00000486016 EBI3Q14213 229 aa2.28□□□□□ -2.04
GCFC2-209ENST00000486016 LASP1Q14847 261 aaKnown RBP2.28□□□□□ -2.04
GCFC2-209ENST00000486016 RPS6KA1Q15418 735 aa2.28□□□□□ -2.04
GCFC2-209ENST00000486016 QRICH1Q2TAL8 776 aa2.28□□□□□ -2.04
GCFC2-209ENST00000486016 IFI44LQ53G44 452 aa2.28□□□□□ -2.04
GCFC2-209ENST00000486016 IRGCQ6NXR0 463 aa2.28□□□□□ -2.04
GCFC2-209ENST00000486016 SCARA5Q6ZMJ2 495 aa2.28□□□□□ -2.04
GCFC2-209ENST00000486016 CYP4V2Q6ZWL3 525 aaPredicted RBP2.28□□□□□ -2.04
GCFC2-209ENST00000486016 PRSS42Q7Z5A4 293 aa2.28□□□□□ -2.04
GCFC2-209ENST00000486016 TMEM126BQ8IUX1 230 aa2.28□□□□□ -2.04
GCFC2-209ENST00000486016 SFRP1Q8N474 314 aa2.28□□□□□ -2.04
GCFC2-209ENST00000486016 C14orf178Q8N769 122 aaPredicted RBP2.28□□□□□ -2.04
GCFC2-209ENST00000486016 RNASE8Q8TDE3 154 aaKnown RBP2.28□□□□□ -2.04
GCFC2-209ENST00000486016 ST7LQ8TDW4 575 aa2.28□□□□□ -2.04
GCFC2-209ENST00000486016 SRSF12Q8WXF0 261 aaKnown RBP2.28□□□□□ -2.04
GCFC2-209ENST00000486016 SNX21Q969T3 373 aa2.28□□□□□ -2.04
GCFC2-209ENST00000486016 FAM46BQ96A09 425 aa2.28□□□□□ -2.04
GCFC2-209ENST00000486016 MRPL24Q96A35 216 aaKnown RBP2.28□□□□□ -2.04
GCFC2-209ENST00000486016 C16orf58Q96GQ5 468 aa2.28□□□□□ -2.04
GCFC2-209ENST00000486016 CCDC43Q96MW1 224 aaKnown RBP2.28□□□□□ -2.04
GCFC2-209ENST00000486016 AKIRIN1Q9H9L7 192 aaPredicted RBP2.28□□□□□ -2.04
GCFC2-209ENST00000486016 ELL3Q9HB65 397 aaPredicted RBP2.28□□□□□ -2.04
GCFC2-209ENST00000486016 MID1IP1Q9NPA3 183 aa2.28□□□□□ -2.04
GCFC2-209ENST00000486016 C5orf51A6NDU8 294 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 TRIM64A6NGJ6 449 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 TRIM64BA6NI03 449 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 CACNB4O00305 520 aaPredicted RBP2.27□□□□□ -2.05
GCFC2-209ENST00000486016 SNRPCP09234 159 aaKnown RBP2.27□□□□□ -2.05
GCFC2-209ENST00000486016 CPA3P15088 417 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 SMSP52788 366 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 MFAP2P55001 183 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 UCP2P55851 309 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 UBXN1Q04323 297 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 AP1B1Q10567 949 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 RPA4Q13156 261 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 STXBP2Q15833 593 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 IL17AQ16552 155 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 C2orf76Q3KRA6 126 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 SLC22A10Q63ZE4 541 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 ALKBH5Q6P6C2 394 aaKnown RBP2.27□□□□□ -2.05
GCFC2-209ENST00000486016 C17orf64Q86WR6 236 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 TGIF2LYQ8IUE0 185 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 WDR49Q8IV35 697 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 GGHQ92820 318 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 C5orf30Q96GV9 206 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 PCED1BQ96HM7 432 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 OR5M11Q96RB7 305 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 MRPL9Q9BYD2 267 aaKnown RBP2.27□□□□□ -2.05
GCFC2-209ENST00000486016 NAPBQ9H115 298 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 CXXC4Q9H2H0 198 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 MAGEF1Q9HAY2 307 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 DNAJC11Q9NVH1 559 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 MIS18AQ9NYP9 233 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 PRODH2Q9UF12 536 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 MAD2L2Q9UI95 211 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 PSORS1C1Q9UIG5 152 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 NEU3Q9UQ49 428 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 SNX5Q9Y5X3 404 aa2.27□□□□□ -2.05
GCFC2-209ENST00000486016 MYO10Q9HD67 2058 aa2.26□□□□□ -2.05
GCFC2-209ENST00000486016 MFSD2BA6NFX1 497 aa2.26□□□□□ -2.05
GCFC2-209ENST00000486016 DDX39AO00148 427 aaKnown RBP2.26□□□□□ -2.05
GCFC2-209ENST00000486016 SYT7O43581 403 aa2.26□□□□□ -2.05
GCFC2-209ENST00000486016 KIAA0513O60268 411 aa2.26□□□□□ -2.05
GCFC2-209ENST00000486016 KERAO60938 352 aa2.26□□□□□ -2.05
GCFC2-209ENST00000486016 FOXH1O75593 365 aa2.26□□□□□ -2.05
GCFC2-209ENST00000486016 BAG2O95816 211 aa2.26□□□□□ -2.05
GCFC2-209ENST00000486016 OLFM2O95897 454 aa2.26□□□□□ -2.05
GCFC2-209ENST00000486016 PNPP00491 289 aa2.26□□□□□ -2.05
GCFC2-209ENST00000486016 NUDT17P0C025 328 aa2.26□□□□□ -2.05
GCFC2-209ENST00000486016 IL2RGP31785 369 aa2.26□□□□□ -2.05
GCFC2-209ENST00000486016 P2RY4P51582 365 aa2.26□□□□□ -2.05
GCFC2-209ENST00000486016 NPRL3Q12980 569 aa2.26□□□□□ -2.05
GCFC2-209ENST00000486016 MEF2DQ14814 521 aa2.26□□□□□ -2.05
GCFC2-209ENST00000486016 HFEQ30201 348 aa2.26□□□□□ -2.05
GCFC2-209ENST00000486016 TFDP3Q5H9I0 405 aa2.26□□□□□ -2.05
GCFC2-209ENST00000486016 SERPINA12Q8IW75 414 aa2.26□□□□□ -2.05
GCFC2-209ENST00000486016 CNTN4Q8IWV2 1026 aa2.26□□□□□ -2.05
GCFC2-209ENST00000486016 ZNF444Q8N0Y2 327 aaPredicted RBP2.26□□□□□ -2.05
GCFC2-209ENST00000486016 THEM5Q8N1Q8 247 aa2.26□□□□□ -2.05
GCFC2-209ENST00000486016 RNF175Q8N4F7 328 aa2.26□□□□□ -2.05
GCFC2-209ENST00000486016 SPATA18Q8TC71 538 aa2.26□□□□□ -2.05
GCFC2-209ENST00000486016 MGARPQ8TDB4 240 aa2.26□□□□□ -2.05
GCFC2-209ENST00000486016 ULK4Q96C45 1275 aa2.26□□□□□ -2.05
GCFC2-209ENST00000486016 CTRCQ99895 268 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms