RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 DUSP26Q9BV47 211 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.69□□□□□ -1.18
SF3A1-208ENST00000485618 EPN3Q9H201 632 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 OR10A5Q9H207 317 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 CDCP1Q9H5V8 836 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 HHATLQ9HCP6 504 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 DDX18Q9NVP1 670 aaKnown RBP7.69□□□□□ -1.18
SF3A1-208ENST00000485618 FAM120CQ9NX05 1096 aaKnown RBP7.69□□□□□ -1.18
SF3A1-208ENST00000485618 MYOTQ9UBF9 498 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 ERVK-11Q9UQG0 969 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 TRAV17A0A0B4J275 112 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 MYOCOSA0A1B0GUC4 107 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 DUXAA6NLW8 204 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 WASHC1A8K0Z3 465 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 TGFBR3LH3BV60 316 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 RNASET2O00584 256 aaKnown RBP7.68□□□□□ -1.18
SF3A1-208ENST00000485618 TP53I11O14683 189 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 EMC8O43402 210 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 CCDC22O60826 627 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 DNAJB5O75953 348 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 AGR2O95994 175 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 IGKV3-11P04433 115 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 LAMP1P11279 417 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 NAGAP17050 411 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 NCF2P19878 526 aaPredicted RBP7.68□□□□□ -1.18
SF3A1-208ENST00000485618 DRD5P21918 477 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 MAGEA8P43361 318 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 PRIM2P49643 509 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 HLCSP50747 726 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 ATP4BP51164 291 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 SSR4P51571 173 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 GPR143P51810 404 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 PSMD4P55036 377 aaKnown RBP7.68□□□□□ -1.18
SF3A1-208ENST00000485618 SLC37A1P57057 533 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 KCNK10P57789 538 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 MLF1P58340 268 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 TXNL4AP83876 142 aaKnown RBP7.68□□□□□ -1.18
SF3A1-208ENST00000485618 Q0VFX4 171 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 KLRB1Q12918 225 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 HSPB3Q12988 150 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 RAPSNQ13702 412 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 SQLEQ14534 574 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 PRICKLE4Q2TBC4 344 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 SLC9B1Q4ZJI4 515 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 IGFL2Q6UWQ7 119 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 MSANTD1Q6ZTZ1 278 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 RIMKLAQ8IXN7 391 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 ARMC10Q8N2F6 343 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 FAM98AQ8NCA5 519 aaKnown RBP7.68□□□□□ -1.18
SF3A1-208ENST00000485618 ADCY4Q8NFM4 1077 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 OR7A2PQ8NGA2 310 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 OR52R1Q8NGF1 315 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 OR56A1Q8NGH5 318 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 OR9A2Q8NGT5 310 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 ZNF721Q8TF20 911 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 CTHRC1Q96CG8 243 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 ELP4Q96EB1 424 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 HSPBAP1Q96EW2 488 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 ITCHQ96J02 903 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 OR52E6Q96RD3 313 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 GAL3ST4Q96RP7 486 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 NUDT9Q9BW91 350 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 ZNF552Q9H707 407 aaPredicted RBP7.68□□□□□ -1.18
SF3A1-208ENST00000485618 TIMMDC1Q9NPL8 285 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 SLAMF7Q9NQ25 335 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 ZNF71Q9NQZ8 489 aaPredicted RBP7.68□□□□□ -1.18
SF3A1-208ENST00000485618 SDR39U1Q9NRG7 319 aaPredicted RBP7.68□□□□□ -1.18
SF3A1-208ENST00000485618 FGFR1OP2Q9NVK5 253 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 KLHL14Q9P2G3 628 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 GIMAP2Q9UG22 337 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 ANAPC2Q9UJX6 822 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 FAF1Q9UNN5 650 aaPredicted RBP7.68□□□□□ -1.18
SF3A1-208ENST00000485618 B3GNT3Q9Y2A9 372 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 TP53TG5Q9Y2B4 290 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 OR10H1Q9Y4A9 318 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 CLDN16Q9Y5I7 305 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 SNX8Q9Y5X2 465 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 GPR45Q9Y5Y3 372 aa7.68□□□□□ -1.18
SF3A1-208ENST00000485618 RP1L1Q8IWN7 2480 aaPredicted RBP7.68□□□□□ -1.18
SF3A1-208ENST00000485618 MED13Q9UHV7 2174 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 BOD1L1Q8NFC6 3051 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 FAM234BA2RU67 622 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 OR5H15A6NDH6 313 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 A8MVJ9 347 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 ZNF195O14628 629 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 HS6ST1O60243 411 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 ABCB7O75027 752 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 ITGA10O75578 1167 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 OR2J2O76002 312 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 PGRP06401 933 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 ADSLP30566 484 aaPredicted RBP7.67□□□□□ -1.18
SF3A1-208ENST00000485618 TRHRP34981 398 aaPredicted RBP7.67□□□□□ -1.18
SF3A1-208ENST00000485618 SOX11P35716 441 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 PPICP45877 212 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 MRPL19P49406 292 aaKnown RBP7.67□□□□□ -1.18
SF3A1-208ENST00000485618 CLK3P49761 638 aaKnown RBP7.67□□□□□ -1.18
SF3A1-208ENST00000485618 POLR2JP52435 117 aaKnown RBP7.67□□□□□ -1.18
SF3A1-208ENST00000485618 EFNA3P52797 238 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 PRKAG1P54619 331 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 NME5P56597 212 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms