RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 MYF5P13349 255 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 RNH1P13489 461 aaKnown RBP15.66■□□□□ 0.1
CTSA-207ENST00000484855 NT5EP21589 574 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 EPHA8P29322 1005 aaPredicted RBP15.66■□□□□ 0.1
CTSA-207ENST00000484855 GPLD1P80108 840 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 IL1RL1Q01638 556 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 FAM53BQ14153 422 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 PUM1Q14671 1186 aaKnown RBP eCLIP15.66■□□□□ 0.1
CTSA-207ENST00000484855 PLK5Q496M5 336 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 ATAD3BQ5T9A4 648 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 GARNL3Q5VVW2 1013 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 PRAMEF8Q5VWM4 474 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 PRAMEF7Q5VXH5 474 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 GALNT5Q7Z7M9 940 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 CYP4Z1Q86W10 505 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 PLXDC1Q8IUK5 500 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 ATG16L2Q8NAA4 619 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 ADAMTS15Q8TE58 950 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 APOBEC4Q8WW27 367 aaKnown RBP15.66■□□□□ 0.1
CTSA-207ENST00000484855 ZNF354BQ96LW1 612 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 MUS81Q96NY9 551 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 PIP5K1AQ99755 562 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 SPATA5L1Q9BVQ7 753 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 BTBD2Q9BX70 525 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 TECTAO75443 2155 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 A0A0G2JPF8 293 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 HNRNPCL2B2RXH8 293 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 HNRNPCL3B7ZW38 293 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 MITFO75030 526 aaPredicted RBP15.66■□□□□ 0.1
CTSA-207ENST00000484855 NSA2O95478 260 aaKnown RBP15.66■□□□□ 0.1
CTSA-207ENST00000484855 HNRNPCL4P0DMR1 293 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 ETS2P15036 469 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 RHCEP18577 417 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 NR1D2Q14995 579 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 CDC73Q6P1J9 531 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 C16orf62Q7Z3J2 963 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 WDR53Q7Z5U6 358 aaPredicted RBP15.66■□□□□ 0.1
CTSA-207ENST00000484855 APLFQ8IW19 511 aaPredicted RBP15.66■□□□□ 0.1
CTSA-207ENST00000484855 CARFQ8N187 725 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 OR52J3Q8NH60 311 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 EDAQ92838 391 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 ANKRD9Q96BM1 317 aaPredicted RBP15.66■□□□□ 0.1
CTSA-207ENST00000484855 RSPO3Q9BXY4 272 aaPredicted RBP15.66■□□□□ 0.1
CTSA-207ENST00000484855 CLK4Q9HAZ1 481 aaKnown RBP15.66■□□□□ 0.1
CTSA-207ENST00000484855 NLGN3Q9NZ94 848 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 LIPT1Q9Y234 373 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 ASXL3Q9C0F0 2248 aa15.66■□□□□ 0.1
CTSA-207ENST00000484855 RP1P56715 2156 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 EME2A4GXA9 379 aaPredicted RBP15.65■□□□□ 0.1
CTSA-207ENST00000484855 DUXAA6NLW8 204 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 SLITRK5O94991 958 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 BMP10O95393 424 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 CLPTM1O96005 669 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 ATP6V1B1P15313 513 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 ARL4DP49703 201 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 SEPHS1P49903 392 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 TPD52P55327 224 aaPredicted RBP15.65■□□□□ 0.1
CTSA-207ENST00000484855 APOFQ13790 326 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 KCNAB1Q14722 419 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 TRMT12Q53H54 448 aaKnown RBP15.65■□□□□ 0.1
CTSA-207ENST00000484855 ZNF605Q86T29 641 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 C1orf210Q8IVY1 113 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 MAML2Q8IZL2 1156 aaPredicted RBP15.65■□□□□ 0.1
CTSA-207ENST00000484855 C8orf59Q8N0T1 100 aaPredicted RBP15.65■□□□□ 0.1
CTSA-207ENST00000484855 SIMC1Q8NDZ2 872 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 PIK3C3Q8NEB9 887 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 OR4C15Q8NGM1 316 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 DOK4Q8TEW6 326 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 GIPC3Q8TF64 312 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 PIGKQ92643 395 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 PEX11GQ96HA9 241 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 NECAB3Q96P71 396 aaPredicted RBP15.65■□□□□ 0.1
CTSA-207ENST00000484855 KRT84Q9NSB2 600 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 CALML5Q9NZT1 146 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 C19orf53Q9UNZ5 99 aaPredicted RBP15.65■□□□□ 0.1
CTSA-207ENST00000484855 MRPS33Q9Y291 106 aaKnown RBP15.65■□□□□ 0.1
CTSA-207ENST00000484855 ADAMTS20P59510 1910 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 FITM1A5D6W6 292 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 B4GAT1O43505 415 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 ITGAMP11215 1152 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 CDH2P19022 906 aaPredicted RBP15.65■□□□□ 0.1
CTSA-207ENST00000484855 CSF2RBP32927 897 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 SOX18P35713 384 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 AVPR1BP47901 424 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 HPCAP84074 193 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 CFHR1Q03591 330 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 GANABQ14697 944 aaKnown RBP15.65■□□□□ 0.1
CTSA-207ENST00000484855 EXOC3L2Q2M3D2 409 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 FAM214AQ32MH5 1076 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 INAVAQ3KP66 663 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 SNAP47Q5SQN1 464 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 FHL5Q5TD97 284 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 FAHD1Q6P587 224 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 GATAD2AQ86YP4 633 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 TSPAN14Q8NG11 270 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 OR6C4Q8NGE1 309 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 VANGL1Q8TAA9 524 aaPredicted RBP15.65■□□□□ 0.1
CTSA-207ENST00000484855 ADAMTS18Q8TE60 1221 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 SLC9A6Q92581 669 aa15.65■□□□□ 0.1
CTSA-207ENST00000484855 MMABQ96EY8 250 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms