RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 DDX18Q9NVP1 670 aaKnown RBP10.86□□□□□ -0.67
CDK5RAP2-217ENST00000484546 TAS2R9Q9NYW1 312 aa10.86□□□□□ -0.67
CDK5RAP2-217ENST00000484546 HAO1Q9UJM8 370 aa10.86□□□□□ -0.67
CDK5RAP2-217ENST00000484546 MAPRE3Q9UPY8 281 aa10.86□□□□□ -0.67
CDK5RAP2-217ENST00000484546 PCDHGB6Q9Y5F9 930 aa10.86□□□□□ -0.67
CDK5RAP2-217ENST00000484546 NBASA2RRP1 2371 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 MYO1GB0I1T2 1018 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 KLF11O14901 512 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 SCAMP2O15127 329 aaKnown RBP10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 HDAC3O15379 428 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 SNNO75324 88 aaPredicted RBP10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 NEURL1O76050 574 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 LBPP18428 481 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 PRPS1L1P21108 318 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 KRT20P35900 424 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 MANFP55145 182 aaKnown RBP10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 DCAF7P61962 342 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 EMX2Q04743 252 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 DUSP2Q05923 314 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 ZNF155Q12901 538 aaPredicted RBP10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 ZNHIT3Q15649 155 aaPredicted RBP10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 TRMT12Q53H54 448 aaKnown RBP10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 ZNF628Q5EBL2 1059 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 PIGGQ5H8A4 983 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 CPTPQ5TA50 214 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 TMEM107Q6UX40 140 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 GALNT11Q8NCW6 608 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 PSD4Q8NDX1 1056 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 DNAJB8Q8NHS0 232 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 C16orf52Q8NHV5 167 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 FAR1Q8WVX9 515 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 ZNF75CPQ92670 426 aaPredicted RBP10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 TP53INP1Q96A56 240 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 SCMH1Q96GD3 660 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 SGCZQ96LD1 299 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 HES7Q9BYE0 225 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 AKTIPQ9H8T0 292 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 TRIM45Q9H8W5 580 aaPredicted RBP10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 MEAF6Q9HAF1 191 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 SACM1LQ9NTJ5 587 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 TAS2R7Q9NYW3 318 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 NTNG1Q9Y2I2 539 aa10.85□□□□□ -0.67
CDK5RAP2-217ENST00000484546 TMEM200CA6NKL6 621 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 TP53I11O14683 189 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 SASH3O75995 380 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 G6PDP11413 515 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 ZNF24P17028 368 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 GPX3P22352 226 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 MC3RP41968 323 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 MEOX1P50221 254 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 PMP22Q01453 160 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 ALDH6A1Q02252 535 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 PLGLB1Q02325 96 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 KCNC4Q03721 635 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 SRSF11Q05519 484 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 PLCXD2Q0VAA5 305 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 PTGR1Q14914 329 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 RPS6KA2Q15349 733 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 CEBPEQ15744 281 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 NNATQ16517 81 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 GK5Q6ZS86 529 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 FAM47EQ6ZV65 393 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 WDR75Q8IWA0 830 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 LRRC34Q8IZ02 419 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 NATD1Q8N6N6 113 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 ZNF615Q8N8J6 731 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 GOLM1Q8NBJ4 401 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 POGLUT1Q8NBL1 392 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 C17orf47Q8NEP4 570 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 OR5M3Q8NGP4 307 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 PIWIL2Q8TC59 973 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 CIDECQ96AQ7 238 aaPredicted RBP10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 CTHRC1Q96CG8 243 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 SPACA9Q96E40 222 aaPredicted RBP10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 ZNF764Q96H86 408 aaPredicted RBP10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 LCORQ96JN0 433 aaPredicted RBP10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 AMDHD1Q96NU7 426 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 ITPAQ9BY32 194 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 DPY30Q9C005 99 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 GLIPR2Q9H4G4 154 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 CLMPQ9H6B4 373 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 OR10H1Q9Y4A9 318 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 UBR5O95071 2799 aaPredicted RBP10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 TENM4Q6N022 2769 aa10.84□□□□□ -0.67
CDK5RAP2-217ENST00000484546 A0A087WV62 115 aa10.83□□□□□ -0.68
CDK5RAP2-217ENST00000484546 GOLGA8QA0A0J9YX86 632 aa10.83□□□□□ -0.68
CDK5RAP2-217ENST00000484546 GOLGA8OA6NCC3 632 aa10.83□□□□□ -0.68
CDK5RAP2-217ENST00000484546 ANKUB1A6NFN9 424 aa10.83□□□□□ -0.68
CDK5RAP2-217ENST00000484546 TCP11X1B4DZS4 312 aa10.83□□□□□ -0.68
CDK5RAP2-217ENST00000484546 GOLGA8NF8WBI6 632 aa10.83□□□□□ -0.68
CDK5RAP2-217ENST00000484546 ACOT7O00154 380 aa10.83□□□□□ -0.68
CDK5RAP2-217ENST00000484546 TFECO14948 347 aaPredicted RBP10.83□□□□□ -0.68
CDK5RAP2-217ENST00000484546 ACOX3O15254 700 aa10.83□□□□□ -0.68
CDK5RAP2-217ENST00000484546 CFLARO15519 480 aa10.83□□□□□ -0.68
CDK5RAP2-217ENST00000484546 PEX1O43933 1283 aa10.83□□□□□ -0.68
CDK5RAP2-217ENST00000484546 TBX19O60806 448 aa10.83□□□□□ -0.68
CDK5RAP2-217ENST00000484546 DIAPH2O60879 1101 aa10.83□□□□□ -0.68
CDK5RAP2-217ENST00000484546 ERN1O75460 977 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms