RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 CLCN2P51788 898 aa18.54■□□□□ 0.56
TRAPPC12-220ENST00000482645 MNAT1P51948 309 aa18.54■□□□□ 0.56
TRAPPC12-220ENST00000482645 ART3Q13508 389 aa18.54■□□□□ 0.56
TRAPPC12-220ENST00000482645 EXOSC7Q15024 291 aaKnown RBP18.54■□□□□ 0.56
TRAPPC12-220ENST00000482645 TBR1Q16650 682 aa18.54■□□□□ 0.56
TRAPPC12-220ENST00000482645 TRMT12Q53H54 448 aaKnown RBP18.54■□□□□ 0.56
TRAPPC12-220ENST00000482645 ZNF628Q5EBL2 1059 aa18.54■□□□□ 0.56
TRAPPC12-220ENST00000482645 SZRD1Q7Z422 152 aa18.54■□□□□ 0.56
TRAPPC12-220ENST00000482645 SIRT6Q8N6T7 355 aa18.54■□□□□ 0.56
TRAPPC12-220ENST00000482645 PCYOX1LQ8NBM8 494 aa18.54■□□□□ 0.56
TRAPPC12-220ENST00000482645 APCDD1LQ8NCL9 501 aa18.54■□□□□ 0.56
TRAPPC12-220ENST00000482645 OR4A15Q8NGL6 344 aa18.54■□□□□ 0.56
TRAPPC12-220ENST00000482645 BRIX1Q8TDN6 353 aaKnown RBP18.54■□□□□ 0.56
TRAPPC12-220ENST00000482645 ZNF721Q8TF20 911 aa18.54■□□□□ 0.56
TRAPPC12-220ENST00000482645 THAP3Q8WTV1 239 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC12-220ENST00000482645 VMP1Q96GC9 406 aa18.54■□□□□ 0.56
TRAPPC12-220ENST00000482645 PANX1Q96RD7 426 aa18.54■□□□□ 0.56
TRAPPC12-220ENST00000482645 INPP5KQ9BT40 448 aa18.54■□□□□ 0.56
TRAPPC12-220ENST00000482645 NUDT9Q9BW91 350 aa18.54■□□□□ 0.56
TRAPPC12-220ENST00000482645 PRORYQ9H606 182 aa18.54■□□□□ 0.56
TRAPPC12-220ENST00000482645 MMP25Q9NPA2 562 aa18.54■□□□□ 0.56
TRAPPC12-220ENST00000482645 SERHLQ9NQF3 203 aa18.54■□□□□ 0.56
TRAPPC12-220ENST00000482645 BCAP29Q9UHQ4 241 aa18.54■□□□□ 0.56
TRAPPC12-220ENST00000482645 PRSS51A0A1B0GVH4 220 aa18.53■□□□□ 0.56
TRAPPC12-220ENST00000482645 B2RBV5 119 aa18.53■□□□□ 0.56
TRAPPC12-220ENST00000482645 RFXANKO14593 260 aa18.53■□□□□ 0.56
TRAPPC12-220ENST00000482645 SCN2BO60939 215 aa18.53■□□□□ 0.56
TRAPPC12-220ENST00000482645 KCNH1O95259 989 aa18.53■□□□□ 0.56
TRAPPC12-220ENST00000482645 CDKN2CP42773 168 aa18.53■□□□□ 0.56
TRAPPC12-220ENST00000482645 CDK9P50750 372 aaKnown RBP18.53■□□□□ 0.56
TRAPPC12-220ENST00000482645 RNF111Q6ZNA4 994 aa18.53■□□□□ 0.56
TRAPPC12-220ENST00000482645 RINLQ6ZS11 566 aa18.53■□□□□ 0.56
TRAPPC12-220ENST00000482645 ZNF771Q7L3S4 317 aaPredicted RBP18.53■□□□□ 0.56
TRAPPC12-220ENST00000482645 APLFQ8IW19 511 aaPredicted RBP18.53■□□□□ 0.56
TRAPPC12-220ENST00000482645 NATD1Q8N6N6 113 aa18.53■□□□□ 0.56
TRAPPC12-220ENST00000482645 SIMC1Q8NDZ2 872 aa18.53■□□□□ 0.56
TRAPPC12-220ENST00000482645 GTF2H4Q92759 462 aa18.53■□□□□ 0.56
TRAPPC12-220ENST00000482645 CCDC115Q96NT0 180 aa18.53■□□□□ 0.56
TRAPPC12-220ENST00000482645 ACSS1Q9NUB1 689 aaPredicted RBP18.53■□□□□ 0.56
TRAPPC12-220ENST00000482645 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.53■□□□□ 0.565e-6■■□□□ 14.1
TRAPPC12-220ENST00000482645 SLAMF8Q9P0V8 285 aa18.53■□□□□ 0.56
TRAPPC12-220ENST00000482645 BTNL2Q9UIR0 455 aa18.53■□□□□ 0.56
TRAPPC12-220ENST00000482645 SNX8Q9Y5X2 465 aa18.53■□□□□ 0.56
TRAPPC12-220ENST00000482645 DOCK10Q96BY6 2186 aa18.52■□□□□ 0.56
TRAPPC12-220ENST00000482645 ANP32DO95626 131 aa18.52■□□□□ 0.56
TRAPPC12-220ENST00000482645 GSNP06396 782 aa18.52■□□□□ 0.56
TRAPPC12-220ENST00000482645 SOAT1P35610 550 aa18.52■□□□□ 0.56
TRAPPC12-220ENST00000482645 FRKP42685 505 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC12-220ENST00000482645 GPR143P51810 404 aa18.52■□□□□ 0.56
TRAPPC12-220ENST00000482645 MGAT2Q10469 447 aa18.52■□□□□ 0.56
TRAPPC12-220ENST00000482645 MAP4K2Q12851 820 aa18.52■□□□□ 0.56
TRAPPC12-220ENST00000482645 CAPRIN1Q14444 709 aaKnown RBP18.52■□□□□ 0.56
TRAPPC12-220ENST00000482645 TRMT5Q32P41 509 aaKnown RBP18.52■□□□□ 0.56
TRAPPC12-220ENST00000482645 FCRLBQ6BAA4 426 aa18.52■□□□□ 0.56
TRAPPC12-220ENST00000482645 OR7G2Q8NG99 324 aa18.52■□□□□ 0.56
TRAPPC12-220ENST00000482645 OR52R1Q8NGF1 315 aa18.52■□□□□ 0.56
TRAPPC12-220ENST00000482645 ZNF675Q8TD23 568 aa18.52■□□□□ 0.56
TRAPPC12-220ENST00000482645 ELP5Q8TE02 316 aa18.52■□□□□ 0.56
TRAPPC12-220ENST00000482645 SLC39A3Q9BRY0 314 aa18.52■□□□□ 0.56
TRAPPC12-220ENST00000482645 DEFB126Q9BYW3 111 aa18.52■□□□□ 0.56
TRAPPC12-220ENST00000482645 LHPPQ9H008 270 aa18.52■□□□□ 0.56
TRAPPC12-220ENST00000482645 DDX18Q9NVP1 670 aaKnown RBP18.52■□□□□ 0.56
TRAPPC12-220ENST00000482645 GPR83Q9NYM4 423 aa18.52■□□□□ 0.56
TRAPPC12-220ENST00000482645 PTGFRNQ9P2B2 879 aa18.52■□□□□ 0.56
TRAPPC12-220ENST00000482645 MAP10Q9P2G4 905 aa18.52■□□□□ 0.56
TRAPPC12-220ENST00000482645 ZNF223Q9UK11 482 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC12-220ENST00000482645 HNRNPCL1O60812 293 aaKnown RBP18.51■□□□□ 0.55
TRAPPC12-220ENST00000482645 ATP5HO75947 161 aa18.51■□□□□ 0.55
TRAPPC12-220ENST00000482645 IGKV3-11P04433 115 aa18.51■□□□□ 0.55
TRAPPC12-220ENST00000482645 AP2B1P63010 937 aa18.51■□□□□ 0.55
TRAPPC12-220ENST00000482645 HBA1P69905 142 aa18.51■□□□□ 0.55
TRAPPC12-220ENST00000482645 SLC25A3Q00325 362 aa18.51■□□□□ 0.55
TRAPPC12-220ENST00000482645 LRRC74AQ0VAA2 488 aa18.51■□□□□ 0.55
TRAPPC12-220ENST00000482645 GTDC1Q4AE62 458 aa18.51■□□□□ 0.55
TRAPPC12-220ENST00000482645 HSDL2Q6YN16 418 aa18.51■□□□□ 0.55
TRAPPC12-220ENST00000482645 DPP10Q8N608 796 aa18.51■□□□□ 0.55
TRAPPC12-220ENST00000482645 RBM15BQ8NDT2 890 aaKnown RBP18.51■□□□□ 0.55
TRAPPC12-220ENST00000482645 FDCSPQ8NFU4 85 aa18.51■□□□□ 0.55
TRAPPC12-220ENST00000482645 OR5P2Q8WZ92 322 aa18.51■□□□□ 0.55
TRAPPC12-220ENST00000482645 GAL3ST4Q96RP7 486 aa18.51■□□□□ 0.55
TRAPPC12-220ENST00000482645 ARHGAP9Q9BRR9 750 aa18.51■□□□□ 0.55
TRAPPC12-220ENST00000482645 OR10A5Q9H207 317 aa18.51■□□□□ 0.55
TRAPPC12-220ENST00000482645 LIN28AQ9H9Z2 209 aaKnown RBP18.51■□□□□ 0.55
TRAPPC12-220ENST00000482645 SLC6A13Q9NSD5 602 aa18.51■□□□□ 0.55
TRAPPC12-220ENST00000482645 PCDHGB4Q9UN71 923 aa18.51■□□□□ 0.55
TRAPPC12-220ENST00000482645 PPIEQ9UNP9 301 aaKnown RBP18.51■□□□□ 0.55
TRAPPC12-220ENST00000482645 ATMQ13315 3056 aa18.51■□□□□ 0.55
TRAPPC12-220ENST00000482645 NUP214P35658 2090 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 A0A096LPI6 279 aa18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 PRKNO60260 465 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 NME6O75414 186 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 CBX7O95931 251 aa18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 ITGB2P05107 769 aa18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 KRT16P08779 473 aa18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 SOX18P35713 384 aa18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 PRKAG1P54619 331 aa18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 POLE2P56282 527 aa18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 SLC37A1P57057 533 aa18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 NCALDP61601 193 aa18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 FUT7Q11130 342 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms