RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 TMEM102Q8N9M5 508 aaPredicted RBP12.3□□□□□ -0.44
HDAC1-208ENST00000482310 APCDD1LQ8NCL9 501 aa12.3□□□□□ -0.44
HDAC1-208ENST00000482310 VPS37AQ8NEZ2 397 aa12.3□□□□□ -0.44
HDAC1-208ENST00000482310 M1APQ8TC57 530 aa12.3□□□□□ -0.44
HDAC1-208ENST00000482310 ZNF675Q8TD23 568 aa12.3□□□□□ -0.44
HDAC1-208ENST00000482310 OR5P2Q8WZ92 322 aa12.3□□□□□ -0.44
HDAC1-208ENST00000482310 NACC2Q96BF6 587 aa12.3□□□□□ -0.44
HDAC1-208ENST00000482310 PANX1Q96RD7 426 aa12.3□□□□□ -0.44
HDAC1-208ENST00000482310 YIPF4Q9BSR8 244 aa12.3□□□□□ -0.44
HDAC1-208ENST00000482310 DEFB126Q9BYW3 111 aa12.3□□□□□ -0.44
HDAC1-208ENST00000482310 IL1RL2Q9HB29 575 aa12.3□□□□□ -0.44
HDAC1-208ENST00000482310 SIRT3Q9NTG7 399 aaPredicted RBP12.3□□□□□ -0.44
HDAC1-208ENST00000482310 ZCCHC3Q9NUD5 404 aaKnown RBP12.3□□□□□ -0.44
HDAC1-208ENST00000482310 DTX4Q9Y2E6 619 aa12.3□□□□□ -0.44
HDAC1-208ENST00000482310 RNF103-CHMP3A0A140T963 221 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 PRSS51A0A1B0GVH4 220 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 A0A1W2PQ72 361 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 RFXANKO14593 260 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 ANGPT2O15123 496 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 MAN1A2O60476 641 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 F10P00742 488 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 C1QCP02747 245 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 SNRPB2P08579 225 aaKnown RBP12.29□□□□□ -0.44
HDAC1-208ENST00000482310 GALNSP34059 522 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 SOX18P35713 384 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 SLC37A1P57057 533 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 RPS26P62854 115 aaKnown RBP12.29□□□□□ -0.44
HDAC1-208ENST00000482310 MAP4K2Q12851 820 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 GAB1Q13480 694 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 TBR1Q16650 682 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 MMEL1Q495T6 779 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 PAGE3Q5JUK9 113 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 BORAQ6PGQ7 559 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 HSDL2Q6YN16 418 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 ZNF621Q6ZSS3 439 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 SLC29A4Q7RTT9 530 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 TREML1Q86YW5 311 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 NUP43Q8NFH3 380 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 C16orf52Q8NHV5 167 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 PNPT1Q8TCS8 783 aaKnown RBP12.29□□□□□ -0.44
HDAC1-208ENST00000482310 APOBEC4Q8WW27 367 aaKnown RBP12.29□□□□□ -0.44
HDAC1-208ENST00000482310 JADE3Q92613 823 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 ERP27Q96DN0 273 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 ELP4Q96EB1 424 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 FAM120BQ96EK7 910 aaKnown RBP12.29□□□□□ -0.44
HDAC1-208ENST00000482310 ITCHQ96J02 903 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 CCDC106Q9BWC9 280 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 ITPAQ9BY32 194 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 LHPPQ9H008 270 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 RMND5AQ9H871 391 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 MMP25Q9NPA2 562 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 TAS2R9Q9NYW1 312 aa12.29□□□□□ -0.44
HDAC1-208ENST00000482310 WWP2O00308 870 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 UPK1AO00322 258 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 EMC8O43402 210 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 PRAMEF2O60811 474 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 SCN2BO60939 215 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 DCTN3O75935 186 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 IGKV3-11P04433 115 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 SERPINA7P05543 415 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 ICAM2P13598 275 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 S1PR1P21453 382 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 CHI3L1P36222 383 aaPredicted RBP12.28□□□□□ -0.44
HDAC1-208ENST00000482310 CPA2P48052 419 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 CCT3P49368 545 aaKnown RBP12.28□□□□□ -0.44
HDAC1-208ENST00000482310 GPR143P51810 404 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 RNF4P78317 190 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 FUT7Q11130 342 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 MLC1Q15049 377 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 FHL5Q5TD97 284 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 HLA-DQA1Q5Y7H0 255 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 REP15Q6BDI9 236 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 TCTN3Q6NUS6 607 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 LINC00696Q6ZRV3 163 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 NATD1Q8N6N6 113 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 ZNF615Q8N8J6 731 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 ANKS4BQ8N8V4 417 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 C7orf57Q8NEG2 295 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 FDCSPQ8NFU4 85 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 ELP5Q8TE02 316 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 CTHRC1Q96CG8 243 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 AURKBQ96GD4 344 aaPredicted RBP12.28□□□□□ -0.44
HDAC1-208ENST00000482310 CCDC115Q96NT0 180 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 LRRC37BQ96QE4 947 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 NPAS2Q99743 824 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 SLC35A5Q9BS91 424 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 WWTR1Q9GZV5 400 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 MYLK2Q9H1R3 596 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 CDCP1Q9H5V8 836 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 FOLH1BQ9HBA9 442 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 C3orf14Q9HBI5 128 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 NEUROD4Q9HD90 331 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 SLC6A13Q9NSD5 602 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 ZNF639Q9UID6 485 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 BTNL2Q9UIR0 455 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 VPS4AQ9UN37 437 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 ERVK-11Q9UQG0 969 aa12.28□□□□□ -0.44
HDAC1-208ENST00000482310 GCN1Q92616 2671 aaKnown RBP12.28□□□□□ -0.44
HDAC1-208ENST00000482310 C2orf92A0A1B0GVN3 265 aa12.27□□□□□ -0.45
HDAC1-208ENST00000482310 COQ9O75208 318 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms