RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 SIKE1Q9BRV8 207 aa11.36□□□□□ -0.59
TRA2B-212ENST00000480461 DUSP26Q9BV47 211 aa11.36□□□□□ -0.59
TRA2B-212ENST00000480461 FAM107BQ9H098 131 aa11.36□□□□□ -0.59
TRA2B-212ENST00000480461 SIRT3Q9NTG7 399 aaPredicted RBP11.36□□□□□ -0.59
TRA2B-212ENST00000480461 ERVK-19Q9WJR5 959 aa11.36□□□□□ -0.59
TRA2B-212ENST00000480461 A8MUI8 341 aa11.35□□□□□ -0.59
TRA2B-212ENST00000480461 PLOD2O00469 737 aa11.35□□□□□ -0.59
TRA2B-212ENST00000480461 PDPK1O15530 556 aa11.35□□□□□ -0.59
TRA2B-212ENST00000480461 SNX3O60493 162 aa11.35□□□□□ -0.59
TRA2B-212ENST00000480461 SHOX2O60902 331 aaPredicted RBP11.35□□□□□ -0.59
TRA2B-212ENST00000480461 NCF2P19878 526 aaPredicted RBP11.35□□□□□ -0.59
TRA2B-212ENST00000480461 HPCAL1P37235 193 aa11.35□□□□□ -0.59
TRA2B-212ENST00000480461 EMDP50402 254 aa11.35□□□□□ -0.59
TRA2B-212ENST00000480461 MYBPC3Q14896 1274 aa11.35□□□□□ -0.59
TRA2B-212ENST00000480461 RPS6KA2Q15349 733 aa11.35□□□□□ -0.59
TRA2B-212ENST00000480461 FAM174BQ3ZCQ3 159 aa11.35□□□□□ -0.59
TRA2B-212ENST00000480461 ATCAYQ86WG3 371 aa11.35□□□□□ -0.59
TRA2B-212ENST00000480461 GALNT12Q8IXK2 581 aa11.35□□□□□ -0.59
TRA2B-212ENST00000480461 C9orf40Q8IXQ3 194 aa11.35□□□□□ -0.59
TRA2B-212ENST00000480461 ARMC10Q8N2F6 343 aa11.35□□□□□ -0.59
TRA2B-212ENST00000480461 MIER2Q8N344 545 aa11.35□□□□□ -0.59
TRA2B-212ENST00000480461 CPSF7Q8N684 471 aaKnown RBP11.35□□□□□ -0.59
TRA2B-212ENST00000480461 SIRT6Q8N6T7 355 aa11.35□□□□□ -0.59
TRA2B-212ENST00000480461 ZNF675Q8TD23 568 aa11.35□□□□□ -0.59
TRA2B-212ENST00000480461 THAP3Q8WTV1 239 aaPredicted RBP11.35□□□□□ -0.59
TRA2B-212ENST00000480461 ELP4Q96EB1 424 aa11.35□□□□□ -0.59
TRA2B-212ENST00000480461 PELOQ9BRX2 385 aaKnown RBP11.35□□□□□ -0.59
TRA2B-212ENST00000480461 CNPPD1Q9BV87 410 aa11.35□□□□□ -0.59
TRA2B-212ENST00000480461 BHLHE41Q9C0J9 482 aaPredicted RBP11.35□□□□□ -0.59
TRA2B-212ENST00000480461 LHPPQ9H008 270 aa11.35□□□□□ -0.59
TRA2B-212ENST00000480461 SAR1AQ9NR31 198 aa11.35□□□□□ -0.59
TRA2B-212ENST00000480461 ACSS1Q9NUB1 689 aaPredicted RBP11.35□□□□□ -0.59
TRA2B-212ENST00000480461 ZIM2Q9NZV7 527 aa11.35□□□□□ -0.59
TRA2B-212ENST00000480461 DTX4Q9Y2E6 619 aa11.35□□□□□ -0.59
TRA2B-212ENST00000480461 TRBV11-1A0A0K0K1C0 115 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 A0A1W2PRB8 838 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 ASPDHA6ND91 283 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 UPK1AO00322 258 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 PLOD3O60568 738 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 C6orf47O95873 294 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 ITGA3P26006 1051 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 SOX11P35716 441 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 MC3RP41968 323 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 UQCRFS1P47985 274 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 ATP4BP51164 291 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 POLR2JP52435 117 aaKnown RBP11.34□□□□□ -0.59
TRA2B-212ENST00000480461 MANFP55145 182 aaKnown RBP11.34□□□□□ -0.59
TRA2B-212ENST00000480461 HBA1P69905 142 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 RNF4P78317 190 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 SRSF11Q05519 484 aaKnown RBP11.34□□□□□ -0.59
TRA2B-212ENST00000480461 HSPB3Q12988 150 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 MLC1Q15049 377 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 TLR1Q15399 786 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 TCTN3Q6NUS6 607 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 BLOC1S3Q6QNY0 202 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 TMEM107Q6UX40 140 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 SPATA21Q7Z572 469 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 CPLX4Q7Z7G2 160 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 ANKRD46Q86W74 232 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 SAMD14Q8IZD0 417 aaPredicted RBP11.34□□□□□ -0.59
TRA2B-212ENST00000480461 CLEC4FQ8N1N0 589 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 VWA5B2Q8N398 1253 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 C7orf57Q8NEG2 295 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 PSMA8Q8TAA3 256 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 VPS33AQ96AX1 596 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 VMP1Q96GC9 406 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 ABHD17AQ96GS6 310 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 VPS50Q96JG6 964 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 CCT8L2Q96SF2 557 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 PRPF18Q99633 342 aaKnown RBP11.34□□□□□ -0.59
TRA2B-212ENST00000480461 INPP5KQ9BT40 448 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 OR10A5Q9H207 317 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 CDCP1Q9H5V8 836 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 CXorf36Q9H7Y0 433 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 SERHLQ9NQF3 203 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 SLC6A13Q9NSD5 602 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 GPR83Q9NYM4 423 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 NTMQ9P121 344 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 PTGFRNQ9P2B2 879 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 ENTPD4Q9Y227 616 aa11.34□□□□□ -0.59
TRA2B-212ENST00000480461 CROCCQ5TZA2 2017 aa11.33□□□□□ -0.6
TRA2B-212ENST00000480461 PRSS51A0A1B0GVH4 220 aa11.33□□□□□ -0.6
TRA2B-212ENST00000480461 FAM234BA2RU67 622 aa11.33□□□□□ -0.6
TRA2B-212ENST00000480461 SYNDIG1LA6NDD5 238 aa11.33□□□□□ -0.6
TRA2B-212ENST00000480461 ZFAND5O76080 213 aa11.33□□□□□ -0.6
TRA2B-212ENST00000480461 PSMG1O95456 288 aa11.33□□□□□ -0.6
TRA2B-212ENST00000480461 PGRP06401 933 aa11.33□□□□□ -0.6
TRA2B-212ENST00000480461 S100A3P33764 101 aa11.33□□□□□ -0.6
TRA2B-212ENST00000480461 RPL3P39023 403 aaKnown RBP11.33□□□□□ -0.6
TRA2B-212ENST00000480461 CDKN2CP42773 168 aa11.33□□□□□ -0.6
TRA2B-212ENST00000480461 KIR3DL1P43629 444 aa11.33□□□□□ -0.6
TRA2B-212ENST00000480461 CLCN2P51788 898 aa11.33□□□□□ -0.6
TRA2B-212ENST00000480461 CLNS1AP54105 237 aaKnown RBP11.33□□□□□ -0.6
TRA2B-212ENST00000480461 AGKQ53H12 422 aa11.33□□□□□ -0.6
TRA2B-212ENST00000480461 LACTB2Q53H82 288 aaPredicted RBP11.33□□□□□ -0.6
TRA2B-212ENST00000480461 ACER2Q5QJU3 275 aa11.33□□□□□ -0.6
TRA2B-212ENST00000480461 ZNF468Q5VIY5 522 aaPredicted RBP11.33□□□□□ -0.6
TRA2B-212ENST00000480461 JMJD6Q6NYC1 403 aaPredicted RBP11.33□□□□□ -0.6
TRA2B-212ENST00000480461 HSDL2Q6YN16 418 aa11.33□□□□□ -0.6
TRA2B-212ENST00000480461 FAM9CQ8IZT9 166 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms