RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 AURKBQ96GD4 344 aaPredicted RBP10.92□□□□□ -0.66
PDCD11-204ENST00000478543 MESP1Q9BRJ9 268 aa10.92□□□□□ -0.66
PDCD11-204ENST00000478543 ARHGAP9Q9BRR9 750 aa10.92□□□□□ -0.66
PDCD11-204ENST00000478543 TRIM8Q9BZR9 551 aa10.92□□□□□ -0.66
PDCD11-204ENST00000478543 WDR54Q9H977 334 aa10.92□□□□□ -0.66
PDCD11-204ENST00000478543 ANKRA2Q9H9E1 313 aa10.92□□□□□ -0.66
PDCD11-204ENST00000478543 SIRT3Q9NTG7 399 aaPredicted RBP10.92□□□□□ -0.66
PDCD11-204ENST00000478543 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.92□□□□□ -0.66
PDCD11-204ENST00000478543 TAS2R9Q9NYW1 312 aa10.92□□□□□ -0.66
PDCD11-204ENST00000478543 ERVK-11Q9UQG0 969 aa10.92□□□□□ -0.66
PDCD11-204ENST00000478543 PCDHB14Q9Y5E9 798 aa10.92□□□□□ -0.66
PDCD11-204ENST00000478543 NBASA2RRP1 2371 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 IGHV3-20A0A0C4DH32 117 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 RNF103-CHMP3A0A140T963 221 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 TCRBV16S1A1N1A0A5B0 115 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 FXYD1O00168 92 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 ERN1O75460 977 aaKnown RBP10.91□□□□□ -0.66
PDCD11-204ENST00000478543 C1QCP02747 245 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 ATP1B1P05026 303 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 UMODP07911 640 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 KRT16P08779 473 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 RAB40ALP0C0E4 278 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 HOXB9P17482 250 aaPredicted RBP10.91□□□□□ -0.66
PDCD11-204ENST00000478543 PTPN6P29350 595 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 CHI3L1P36222 383 aaPredicted RBP10.91□□□□□ -0.66
PDCD11-204ENST00000478543 PGDP52209 483 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 OR4D2P58180 307 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 PSME3P61289 254 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 RPS15P62841 145 aaKnown RBP10.91□□□□□ -0.66
PDCD11-204ENST00000478543 EEF1A2Q05639 463 aaKnown RBP10.91□□□□□ -0.66
PDCD11-204ENST00000478543 SELPLGQ14242 412 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 MLC1Q15049 377 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 LACTB2Q53H82 288 aaPredicted RBP10.91□□□□□ -0.66
PDCD11-204ENST00000478543 ZNF628Q5EBL2 1059 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 LRIF1Q5T3J3 769 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 C16orf89Q6UX73 402 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 ANGPTL8Q6UXH0 198 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 HACD2Q6Y1H2 254 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 ANKRD37Q7Z713 158 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 DEFB107AQ8IZN7 70 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 ST13P4Q8IZP2 240 aaPredicted RBP10.91□□□□□ -0.66
PDCD11-204ENST00000478543 IL22RA1Q8N6P7 574 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 OR7G2Q8NG99 324 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 OR2Y1Q8NGV0 311 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 GOT1L1Q8NHS2 421 aaPredicted RBP10.91□□□□□ -0.66
PDCD11-204ENST00000478543 PNPT1Q8TCS8 783 aaKnown RBP10.91□□□□□ -0.66
PDCD11-204ENST00000478543 RIT1Q92963 219 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 NKD1Q969G9 470 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 ROPN1LQ96C74 230 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 RBM18Q96H35 190 aaKnown RBP10.91□□□□□ -0.66
PDCD11-204ENST00000478543 CGREF1Q99674 301 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 PELOQ9BRX2 385 aaKnown RBP10.91□□□□□ -0.66
PDCD11-204ENST00000478543 SLC35A5Q9BS91 424 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 SLC25A18Q9H1K4 315 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 NEUROD4Q9HD90 331 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 SEMA3GQ9NS98 782 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 SLC25A37Q9NYZ2 338 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 MAT2BQ9NZL9 334 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 VAPAQ9P0L0 249 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 FARSAQ9Y285 508 aaKnown RBP10.91□□□□□ -0.66
PDCD11-204ENST00000478543 PADI2Q9Y2J8 665 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 MRPS18BQ9Y676 258 aaKnown RBP10.91□□□□□ -0.66
PDCD11-204ENST00000478543 CROCCQ5TZA2 2017 aa10.91□□□□□ -0.66
PDCD11-204ENST00000478543 TRBV5-3A0A0A0MS03 114 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 C17orf105B2RV13 164 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 HRKO00198 91 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 GYG2O15488 501 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 HNRNPCL1O60812 293 aaKnown RBP10.9□□□□□ -0.66
PDCD11-204ENST00000478543 KLF7O75840 302 aaPredicted RBP10.9□□□□□ -0.66
PDCD11-204ENST00000478543 CD63P08962 238 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 UQCRC2P22695 453 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 F8A1P23610 371 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 PTPN4P29074 926 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 CPOXP36551 454 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 CCT3P49368 545 aaKnown RBP10.9□□□□□ -0.66
PDCD11-204ENST00000478543 PRKAG1P54619 331 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 CASP9P55211 416 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 MTPNP58546 118 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 MGAT2Q10469 447 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 TP53BP2Q13625 1128 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 ZNF267Q14586 743 aaPredicted RBP10.9□□□□□ -0.66
PDCD11-204ENST00000478543 EXOSC7Q15024 291 aaKnown RBP10.9□□□□□ -0.66
PDCD11-204ENST00000478543 PRICKLE4Q2TBC4 344 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 TRMT12Q53H54 448 aaKnown RBP10.9□□□□□ -0.66
PDCD11-204ENST00000478543 SFT2D3Q587I9 215 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 RUNDC3AQ59EK9 446 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 CPZQ66K79 652 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 GALNT12Q8IXK2 581 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 KIF2BQ8N4N8 673 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 TRIML2Q8N7C3 387 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 SIMC1Q8NDZ2 872 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 DNAJB8Q8NHS0 232 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 C8orf44Q96CB5 159 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 ELP4Q96EB1 424 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 FAM120BQ96EK7 910 aaKnown RBP10.9□□□□□ -0.66
PDCD11-204ENST00000478543 CPPED1Q9BRF8 314 aaPredicted RBP10.9□□□□□ -0.66
PDCD11-204ENST00000478543 CNPPD1Q9BV87 410 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 CXorf21Q9HAI6 301 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 C3orf14Q9HBI5 128 aa10.9□□□□□ -0.66
PDCD11-204ENST00000478543 ADAP2Q9NPF8 381 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms