RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 BCL2L15Q5TBC7 163 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 CNIH2Q6PI25 160 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 UNC5DQ6UXZ4 953 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 LIPIQ6XZB0 460 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 ANKRD33Q7Z3H0 272 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 CALHM3Q86XJ0 350 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 VRK2Q86Y07 508 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 TMC8Q8IU68 726 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 TESCQ96BS2 214 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 ZNF559Q9BR84 538 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 SNX7Q9UNH6 387 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 CMAHPQ9Y471 501 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 CHD5Q8TDI0 1954 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 EEF1E1O43324 174 aaKnown RBP9.24□□□□□ -0.93
CMC1-209ENST00000477739 OR5F1O95221 314 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 BLVRAP53004 296 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 CDH11P55287 796 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 RAE1P78406 368 aaKnown RBP9.24□□□□□ -0.93
CMC1-209ENST00000477739 C2orf27AQ580R0 203 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 LIPJQ5W064 366 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 PNCKQ6P2M8 343 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 FIGNL1Q6PIW4 674 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 RPTNQ6XPR3 784 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 SAMD12Q8N8I0 201 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 PLA2G15Q8NCC3 412 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 BBS1Q8NFJ9 593 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 OR6T1Q8NGN1 323 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 NEIL3Q8TAT5 605 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 ZNF671Q8TAW3 534 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 BTN2A2Q8WVV5 523 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 SLC35G5Q96KT7 338 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 ZSWIM3Q96MP5 696 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 FRMD6Q96NE9 622 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 MCCC1Q96RQ3 725 aaPredicted RBP9.24□□□□□ -0.93
CMC1-209ENST00000477739 MKRN2Q9H000 416 aaKnown RBP9.24□□□□□ -0.93
CMC1-209ENST00000477739 SERHL2Q9H4I8 314 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 SLAMF7Q9NQ25 335 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 PLXNA3P51805 1871 aa9.24□□□□□ -0.93
CMC1-209ENST00000477739 SLC30A4O14863 429 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 GCM2O75603 506 aaPredicted RBP9.23□□□□□ -0.93
CMC1-209ENST00000477739 SLC35G4P0C7Q5 338 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 C1GALT1C1LP0DN25 315 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 TIMP2P16035 220 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 NPPBP16860 134 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 AP2S1P53680 142 aaPredicted RBP9.23□□□□□ -0.93
CMC1-209ENST00000477739 HCCSP53701 268 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 RBBP4Q09028 425 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 FCHO2Q0JRZ9 810 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 TATDN3Q17R31 274 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 METTL2BQ6P1Q9 378 aaKnown RBP9.23□□□□□ -0.93
CMC1-209ENST00000477739 PSRC1Q6PGN9 363 aaPredicted RBP9.23□□□□□ -0.93
CMC1-209ENST00000477739 AMIGO1Q86WK6 493 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 YIPF7Q8N8F6 280 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 SLC37A3Q8NCC5 494 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 ECHDC3Q96DC8 303 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 TREX2Q9BQ50 279 aaPredicted RBP9.23□□□□□ -0.93
CMC1-209ENST00000477739 BARHL1Q9BZE3 327 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 PLA2G12AQ9BZM1 189 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 HOXD1Q9GZZ0 328 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 ZBP1Q9H171 429 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 CA5BQ9Y2D0 317 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 PCDHGA2Q9Y5H1 932 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 GVINP1Q7Z2Y8 2422 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 ANKRD36A6QL64 1941 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 TRBV5-3A0A0A0MS03 114 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 J3QLW9 94 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 SSNA1O43805 119 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 ZNF19P17023 458 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 KELP23276 732 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 SLC6A11P48066 632 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 TUBA1BP68363 451 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 TBCEQ15813 527 aaPredicted RBP9.23□□□□□ -0.93
CMC1-209ENST00000477739 ZNF181Q2M3W8 571 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 SPIN4Q56A73 249 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 ZNF805Q5CZA5 627 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 TUBA1AQ71U36 451 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 PARS2Q7L3T8 475 aaKnown RBP9.23□□□□□ -0.93
CMC1-209ENST00000477739 OXR1Q8N573 874 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 TRAM1L1Q8N609 369 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 L3MBTL4Q8NA19 623 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 KCTD7Q96MP8 289 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 ZCCHC2Q9C0B9 1178 aaKnown RBP9.23□□□□□ -0.93
CMC1-209ENST00000477739 FBXL12Q9NXK8 326 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 BTNL2Q9UIR0 455 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 GSTK1Q9Y2Q3 226 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 SCN5AQ14524 2016 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 RASGRP1O95267 797 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 HBQ1P09105 142 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 CD3GP09693 182 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 TIE1P35590 1138 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 NAA10P41227 235 aaPredicted RBP9.23□□□□□ -0.93
CMC1-209ENST00000477739 SLC6A12P48065 614 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 GZMMP51124 257 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 IFITM2Q01629 132 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 ZNF45Q02386 682 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 OC90Q02509 493 aaPredicted RBP9.23□□□□□ -0.93
CMC1-209ENST00000477739 TAP2Q03519 686 aa9.23□□□□□ -0.93
CMC1-209ENST00000477739 SRSF5Q13243 272 aaKnown RBP9.23□□□□□ -0.93
CMC1-209ENST00000477739 PUM1Q14671 1186 aaKnown RBP eCLIP9.23□□□□□ -0.93
CMC1-209ENST00000477739 ANGPT1Q15389 498 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms