RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 CEBPBP17676 345 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 EFNA1P20827 205 aaPredicted RBP3.5□□□□□ -1.85
UBR3-209ENST00000477461 CASQ1P31415 396 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 CCR1P32246 355 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 RDXP35241 583 aaKnown RBP3.5□□□□□ -1.85
UBR3-209ENST00000477461 WNT5AP41221 380 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 DNA2P51530 1060 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 HADHBP55084 474 aaKnown RBP3.5□□□□□ -1.85
UBR3-209ENST00000477461 GNG11P61952 73 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 CX3CL1P78423 397 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 NTHL1P78549 312 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 HSPB3Q12988 150 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 IL11RAQ14626 422 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 RPS6KA1Q15418 735 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 SLC25A52Q3SY17 297 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 CCDC14Q49A88 953 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 BOLA3Q53S33 107 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 BRMS1LQ5PSV4 323 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 SEL1L2Q5TEA6 688 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 SYPL2Q5VXT5 272 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 Q6ZSR9 355 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 TMPRSS11FQ6ZWK6 438 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 GET4Q7L5D6 327 aaPredicted RBP3.5□□□□□ -1.85
UBR3-209ENST00000477461 STRADAQ7RTN6 431 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 SLFN11Q7Z7L1 901 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 SCD5Q86SK9 330 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 TAC4Q86UU9 113 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 COMMD2Q86X83 199 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 FAM131BQ86XD5 332 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 CCDC50Q8IVM0 306 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 UNC45BQ8IWX7 931 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 ZNF595Q8IYB9 648 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 CMTM8Q8IZV2 173 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 SLC35F6Q8N357 371 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 ZNF611Q8N823 705 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 NIPA2Q8N8Q9 360 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 BMPERQ8N8U9 685 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 ATP6V0D2Q8N8Y2 350 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 OR5M8Q8NGP6 311 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 CCDC107Q8WV48 283 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 ZNF707Q96C28 371 aaPredicted RBP3.5□□□□□ -1.85
UBR3-209ENST00000477461 TCEAL4Q96EI5 215 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 GIMAP5Q96F15 307 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 C16orf45Q96MC5 204 aaPredicted RBP3.5□□□□□ -1.85
UBR3-209ENST00000477461 CFAP57Q96MR6 1250 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 NECTIN4Q96NY8 510 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 LRRC3BQ96PB8 259 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 SERINC2Q96SA4 455 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 NPY6RQ99463 290 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 SEPHS2Q99611 448 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 DDX50Q9BQ39 737 aaKnown RBP3.5□□□□□ -1.85
UBR3-209ENST00000477461 FNDC11Q9BVV2 318 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 UBE2ZQ9H832 354 aaPredicted RBP3.5□□□□□ -1.85
UBR3-209ENST00000477461 NOL11Q9H8H0 719 aaKnown RBP3.5□□□□□ -1.85
UBR3-209ENST00000477461 ZWILCHQ9H900 591 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 SLC7A10Q9NS82 523 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 OSER1Q9NX31 292 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 HAO2Q9NYQ3 351 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 PCSK1NQ9UHG2 260 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 ZDHHC2Q9UIJ5 367 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 ZNF510Q9Y2H8 683 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 HBS1LQ9Y450 684 aaKnown RBP3.5□□□□□ -1.85
UBR3-209ENST00000477461 CPQQ9Y646 472 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 ALG6Q9Y672 507 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 NUP210Q8TEM1 1887 aaPredicted RBP3.5□□□□□ -1.85
UBR3-209ENST00000477461 PCNTO95613 3336 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 A0A087WW49 117 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 IGLV9-49A0A0B4J1Y8 123 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 IGHV4-61A0A0C4DH41 118 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 LRRD1A4D1F6 860 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 SLC9A3R1O14745 358 aaPredicted RBP3.49□□□□□ -1.85
UBR3-209ENST00000477461 ATP6V0E1O15342 81 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 COCHO43405 550 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 PSTPIP1O43586 416 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 TBX10O75333 385 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 LRCH4O75427 683 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 OAS1P00973 400 aaKnown RBP3.49□□□□□ -1.85
UBR3-209ENST00000477461 IGHV4-59P01825 116 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 FYNP06241 537 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 GATA2P23769 480 aaPredicted RBP3.49□□□□□ -1.85
UBR3-209ENST00000477461 CTNNA2P26232 953 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 MIPP30301 263 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 PCK1P35558 622 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 CCR2P41597 374 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 IFNAR2P48551 515 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 LIMK1P53667 647 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 AIF1P55008 147 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 CDH6P55285 790 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 RWDD2BP57060 319 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 TPI1P60174 286 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 SLC7A9P82251 487 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 MAT1AQ00266 395 aaKnown RBP3.49□□□□□ -1.85
UBR3-209ENST00000477461 OGDHQ02218 1023 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 HNRNPDQ14103 355 aaKnown RBP3.49□□□□□ -1.85
UBR3-209ENST00000477461 PTPRCAPQ14761 206 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 PDK2Q15119 407 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 ERMARDQ5T6L9 678 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 LRRC38Q5VT99 294 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 PRR27Q6MZM9 219 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 DOK6Q6PKX4 331 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms