RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 SPEM1Q8N4L4 309 aa2.54□□□□□ -2
TARDBP-208ENST00000477447 MLKLQ8NB16 471 aa2.54□□□□□ -2
TARDBP-208ENST00000477447 LEMD2Q8NC56 503 aa2.54□□□□□ -2
TARDBP-208ENST00000477447 TMEM185AQ8NFB2 350 aa2.54□□□□□ -2
TARDBP-208ENST00000477447 NEK11Q8NG66 645 aa2.54□□□□□ -2
TARDBP-208ENST00000477447 EXOC6Q8TAG9 804 aa2.54□□□□□ -2
TARDBP-208ENST00000477447 ZPLD1Q8TCW7 415 aa2.54□□□□□ -2
TARDBP-208ENST00000477447 URGCPQ8TCY9 931 aa2.54□□□□□ -2
TARDBP-208ENST00000477447 CRYGNQ8WXF5 182 aa2.54□□□□□ -2
TARDBP-208ENST00000477447 DEFB118Q96PH6 123 aa2.54□□□□□ -2
TARDBP-208ENST00000477447 ACCSQ96QU6 501 aa2.54□□□□□ -2
TARDBP-208ENST00000477447 RANBP9Q96S59 729 aa2.54□□□□□ -2
TARDBP-208ENST00000477447 C19orf43Q9BQ61 176 aa2.54□□□□□ -2
TARDBP-208ENST00000477447 GPR174Q9BXC1 333 aa2.54□□□□□ -2
TARDBP-208ENST00000477447 NLNQ9BYT8 704 aa2.54□□□□□ -2
TARDBP-208ENST00000477447 THAP9Q9H5L6 903 aa2.54□□□□□ -2
TARDBP-208ENST00000477447 HPS4Q9NQG7 708 aa2.54□□□□□ -2
TARDBP-208ENST00000477447 FAM120CQ9NX05 1096 aaKnown RBP2.54□□□□□ -2
TARDBP-208ENST00000477447 CIDEBQ9UHD4 219 aa2.54□□□□□ -2
TARDBP-208ENST00000477447 EMCNQ9ULC0 261 aa2.54□□□□□ -2
TARDBP-208ENST00000477447 NAALAD2Q9Y3Q0 740 aa2.54□□□□□ -2
TARDBP-208ENST00000477447 ZNF175Q9Y473 711 aa2.54□□□□□ -2
TARDBP-208ENST00000477447 NPC1L1Q9UHC9 1359 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 IGHV3OR16-12A0A075B7B8 117 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 TMEM89A2RUT3 159 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 SAP18O00422 153 aaKnown RBP2.53□□□□□ -2
TARDBP-208ENST00000477447 ARPC1BO15143 372 aaKnown RBP2.53□□□□□ -2
TARDBP-208ENST00000477447 NME2P1O60361 137 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 SRPX2O60687 465 aaPredicted RBP2.53□□□□□ -2
TARDBP-208ENST00000477447 BAG2O95816 211 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 APRTP07741 180 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 UMPSP11172 480 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 TMOD1P28289 359 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 MAT2AP31153 395 aaKnown RBP2.53□□□□□ -2
TARDBP-208ENST00000477447 CASP9P55211 416 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 SSTP61278 116 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 LTB4RQ15722 352 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 PPP1R3AQ16821 1122 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 LINC00242Q5T6M2 205 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 BAIAP2L2Q6UXY1 529 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 PRSS48Q7RTY5 328 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 ADAMTSL2Q86TH1 951 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 BATF2Q8N1L9 274 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 FBXL16Q8N461 479 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 COLGALT1Q8NBJ5 622 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 KLHL30-AS1Q8NEE0 82 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 TMEM37Q8WXS4 190 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 P3H4Q92791 437 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 CPXM1Q96SM3 734 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 APOOQ9BUR5 198 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 SIRPDQ9H106 197 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 RSPH9Q9H1X1 276 aaPredicted RBP2.53□□□□□ -2
TARDBP-208ENST00000477447 TNMDQ9H2S6 317 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 TIGARQ9NQ88 270 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.53□□□□□ -2
TARDBP-208ENST00000477447 CENPMQ9NSP4 180 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 TRIM10Q9UDY6 481 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 FETUBQ9UGM5 382 aa2.53□□□□□ -2
TARDBP-208ENST00000477447 STRAPQ9Y3F4 350 aaKnown RBP2.53□□□□□ -2
TARDBP-208ENST00000477447 A0A0U1RRA0 63 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 A0A1W2PQ72 361 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 CCT8L1PA6NM43 557 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 EI24O14681 340 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 RANBP6O60518 1105 aaKnown RBP2.52□□□□□ -2.01
TARDBP-208ENST00000477447 BCAS2O75934 225 aaPredicted RBP2.52□□□□□ -2.01
TARDBP-208ENST00000477447 PDE5AO76074 875 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 IGKV3-15P01624 115 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 PROS1P07225 676 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 GSTA1P08263 222 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 GNSP15586 552 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 SAA4P35542 130 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 VCPP55072 806 aaKnown RBP2.52□□□□□ -2.01
TARDBP-208ENST00000477447 RAG2P55895 527 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 NME3Q13232 169 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 ZKSCAN8Q15776 578 aaPredicted RBP2.52□□□□□ -2.01
TARDBP-208ENST00000477447 MARC1Q5VT66 337 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 TAF3Q5VWG9 929 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 LIPKQ5VXJ0 399 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 MFSD7Q6UXD7 560 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 DPY19L2P2Q6ZN68 376 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 ZNF600Q6ZNG1 722 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 STOX1Q6ZVD7 989 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 YRDCQ86U90 279 aaKnown RBP2.52□□□□□ -2.01
TARDBP-208ENST00000477447 ZNF584Q8IVC4 421 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 LRRC17Q8N6Y2 441 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 CCNYQ8ND76 341 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 OR4F17Q8NGA8 305 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 OR52E1Q8NGJ3 308 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 VN1R17PQ8TDU5 208 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 LHX4Q969G2 390 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 TMEM45BQ96B21 275 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 OR4F4Q96R69 305 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 RUFY1Q96T51 708 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 FAM173AQ9BQD7 235 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 ABCG8Q9H221 673 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 SYTL2Q9HCH5 934 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 ESM1Q9NQ30 184 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 PRR34Q9NV39 138 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 RAI14Q9P0K7 980 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 LHX3Q9UBR4 397 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms