RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 FGD2Q7Z6J4 655 aa14.45□□□□□ -0.1
CLSTN1-205ENST00000477264 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.45□□□□□ -0.1
CLSTN1-205ENST00000477264 SRFBP1Q8NEF9 429 aaKnown RBP14.45□□□□□ -0.1
CLSTN1-205ENST00000477264 DPCDQ9BVM2 203 aaPredicted RBP14.45□□□□□ -0.1
CLSTN1-205ENST00000477264 GSX2Q9BZM3 304 aa14.45□□□□□ -0.1
CLSTN1-205ENST00000477264 POLR2J3Q9H1A7 115 aaKnown RBP14.45□□□□□ -0.1
CLSTN1-205ENST00000477264 OR51J1Q9H342 316 aa14.45□□□□□ -0.1
CLSTN1-205ENST00000477264 GPATCH2Q9NW75 528 aa14.45□□□□□ -0.1
CLSTN1-205ENST00000477264 SLCO1C1Q9NYB5 712 aa14.45□□□□□ -0.1
CLSTN1-205ENST00000477264 COQ3Q9NZJ6 369 aa14.45□□□□□ -0.1
CLSTN1-205ENST00000477264 CBLCQ9ULV8 474 aa14.45□□□□□ -0.1
CLSTN1-205ENST00000477264 YIPF1Q9Y548 306 aa14.45□□□□□ -0.1
CLSTN1-205ENST00000477264 HRO43593 1189 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 CXCL14O95715 111 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 ANXA4P09525 319 aaPredicted RBP14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 ACP2P11117 423 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 ICAM2P13598 275 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 RBMS1P29558 406 aaKnown RBP14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 SLC6A4P31645 630 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 NSG1P42857 185 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 DGKGP49619 791 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 ZNF81P51508 661 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 IRF8Q02556 426 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 SEC23BQ15437 767 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 XKR6Q5GH73 641 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 USP45Q70EL2 814 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 LRRC28Q86X40 367 aaPredicted RBP14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 TCEAL8Q8IYN2 117 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 LINC00471Q8N535 108 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 CLDN19Q8N6F1 224 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 OVCA2Q8WZ82 227 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 SEMA3GQ9NS98 782 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 SCP2D1Q9UJQ7 156 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 CACNG2Q9Y698 323 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 LAMA2P24043 3122 aaKnown RBP14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 TRBV4-1A0A0J9YWV2 114 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 H3BNC9 293 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 KPNA5O15131 536 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 CHST10O43529 356 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 TBX18O95935 607 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 ELAVL4P26378 380 aaKnown RBP14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 FEN1P39748 380 aaKnown RBP14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 AVPR1BP47901 424 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 EPHB3P54753 998 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 PTPN5P54829 565 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 COX10Q12887 443 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 ARMC12Q5T9G4 340 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 GRHL2Q6ISB3 625 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 TMIGD1Q6UXZ0 262 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 CD300LDQ6UXZ3 194 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 IKBIPQ70UQ0 350 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 OVCH2Q7RTZ1 564 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 CFAP52Q8N1V2 620 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 NXPE1Q8N323 547 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 PMEPA1Q969W9 287 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 KCTD12Q96CX2 325 aaKnown RBP14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 EID2BQ96D98 161 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 PDXPQ96GD0 296 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 ZNF582Q96NG8 517 aaPredicted RBP14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 ERMAPQ96PL5 475 aaPredicted RBP14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 RBP7Q96R05 134 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 ASB6Q9NWX5 421 aa14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 ZFP37Q9Y6Q3 630 aaPredicted RBP14.44□□□□□ -0.1
CLSTN1-205ENST00000477264 MEIKINA0A087WXM9 373 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 A0A1W2PPL8 197 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 KRBOX1C9JBD0 128 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 H0YIV9 168 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 LILRB3O75022 631 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 SOX14O95416 240 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 ADH1AP07327 375 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 ZDHHC11BP0C7U3 371 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 TIA1P31483 386 aaKnown RBP eCLIP14.43□□□□□ -0.13e-10■■■■■ 38.8
CLSTN1-205ENST00000477264 SPAM1P38567 509 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 SLC11A2P49281 568 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 PNLIPRP1P54315 467 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 CYP4F8P98187 520 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 ACSM1Q08AH1 577 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 LEXMQ3ZCV2 418 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 KIAA1324Q6UXG2 1013 aaKnown RBP14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 ABI3BPQ7Z7G0 1075 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 CBARPQ8N350 705 aaPredicted RBP14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 OR11H4Q8NGC9 324 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 APOBEC4Q8WW27 367 aaKnown RBP14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 ARHGAP9Q9BRR9 750 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 ZFYVE1Q9HBF4 777 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 UCKL1Q9NWZ5 548 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 RDH8Q9NYR8 311 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 EXTL2Q9UBQ6 330 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 LHX3Q9UBR4 397 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 ACSL5Q9ULC5 683 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 YARS2Q9Y2Z4 477 aaKnown RBP14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 PCDHB9Q9Y5E1 797 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 CCDC88CQ9P219 2028 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 OR10H3O60404 316 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 PRAMEF4O60810 478 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 H1F0P07305 194 aaKnown RBP14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 DNASE1P24855 282 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 NUP62P37198 522 aaPredicted RBP14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 MMP12P39900 470 aa14.43□□□□□ -0.1
CLSTN1-205ENST00000477264 EPHA5P54756 1037 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms