RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 CBR4Q8N4T8 237 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 CELF5Q8N6W0 485 aaKnown RBP4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 DENND6BQ8NEG7 585 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 MAFAQ8NHW3 353 aaPredicted RBP4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 HUS1BQ8NHY5 278 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 ITFG1Q8TB96 612 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 BRIX1Q8TDN6 353 aaKnown RBP4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 CYGBQ8WWM9 190 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 LRTOMTQ8WZ04 291 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 CPT1BQ92523 772 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 NR4A3Q92570 626 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 STAMQ92783 540 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 KIAA1143Q96AT1 154 aaPredicted RBP4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 BIRC7Q96CA5 298 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 CTHRC1Q96CG8 243 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 LGALS12Q96DT0 336 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 FAM122AQ96E09 287 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 AURKBQ96GD4 344 aaPredicted RBP4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 OR2A14Q96R47 310 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 NODALQ96S42 347 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 PFDN5Q99471 154 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 PAFAH2Q99487 392 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 PKP4Q99569 1192 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 P2RY13Q9BPV8 354 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 TREX2Q9BQ50 279 aaPredicted RBP4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 ZNF559Q9BR84 538 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 REG4Q9BYZ8 158 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 FRMD8P1Q9BZ68 369 aaPredicted RBP4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 RHBGQ9H310 441 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 FN3KQ9H479 309 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 RNF121Q9H920 327 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 ARMT1Q9H993 441 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 WDR41Q9HAD4 459 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 DYRK4Q9NR20 520 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 AGPAT4Q9NRZ5 378 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 RASSF1Q9NS23 344 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 KRT84Q9NSB2 600 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 TMOD3Q9NYL9 352 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 USE1Q9NZ43 259 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 OPTCQ9UBM4 332 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 SPASTQ9UBP0 616 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 NUFIP1Q9UHK0 495 aaKnown RBP4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 SCP2D1Q9UJQ7 156 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 SSR3Q9UNL2 185 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 PDE10AQ9Y233 779 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 DLGAP4Q9Y2H0 992 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 SLC6A5Q9Y345 797 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 V9GYQ6 96 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 MYH3P11055 1940 aa4.2□□□□□ -1.74
PIKFYVE-209ENST00000477200 A0A1B0GVI7 797 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 CIB4A0PJX0 185 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 E7ESA3 106 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 F5H6K3 240 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 H3BQ06 376 aaPredicted RBP4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 TMEM189-UBE2V1I3L0A0 370 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 K7ERQ8 282 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 M0QZK8 103 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 AIPO00170 330 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 UBE2CO00762 179 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 GABRDO14764 452 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 MYL12BO14950 172 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 TOX3O15405 576 aaPredicted RBP4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 PSMD3O43242 534 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 GPAA1O43292 621 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 CHP2O43745 196 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 SELENOFO60613 162 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 HCN1O60741 890 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 SOCS5O75159 536 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 PRKRAO75569 313 aaKnown RBP4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 POP7O75817 140 aaKnown RBP4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 KRT33AO76009 404 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 RPP14O95059 124 aaKnown RBP4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 PAPSS2O95340 614 aaPredicted RBP4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 RLN2P04090 185 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 KLK3P07288 261 aaPredicted RBP4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 APRTP07741 180 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 GALTP07902 379 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 INHBAP08476 426 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 OR56A5P0C7T3 313 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 MLNP12872 115 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 RNH1P13489 461 aaKnown RBP4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 CD1EP15812 388 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 MYL12AP19105 171 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 PCMT1P22061 227 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 PAICSP22234 425 aaKnown RBP4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 RPS3P23396 243 aaKnown RBP eCLIP4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 KLRC2P26717 231 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 CALCRP30988 508 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 GDI1P31150 447 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 POLR2IP36954 125 aaKnown RBP4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 RAD52P43351 418 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 BRCC3P46736 316 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 CASP4P49662 377 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 RGS6P49758 472 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 RBP2P50120 134 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 CCR9P51686 369 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 KPNA2P52292 529 aaKnown RBP4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 ATXN3P54252 364 aaPredicted RBP4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 CDH13P55290 713 aa4.19□□□□□ -1.74
PIKFYVE-209ENST00000477200 RAB5BP61020 215 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms