RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 HPF1Q9NWY4 346 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 TAS2R7Q9NYW3 318 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 BCAP29Q9UHQ4 241 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 WBP11Q9Y2W2 641 aaKnown RBP8.96□□□□□ -0.98
HDAC3-208ENST00000476739 COPG1Q9Y678 874 aaKnown RBP8.96□□□□□ -0.98
HDAC3-208ENST00000476739 NBASA2RRP1 2371 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 A0A0G2JMM0 328 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 GOLGA8QA0A0J9YX86 632 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 C2orf92A0A1B0GVN3 265 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 A0A1W2PPB8 328 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 A0A1W2PRS3 328 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 PINLYPA6NC86 204 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 GOLGA8OA6NCC3 632 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 OR6C76A6NM76 312 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 KIR3DP1A8MWS1 328 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 GOLGA8NF8WBI6 632 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 G3V3Y1 287 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 SDHDO14521 159 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 ZNF195O14628 629 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 KLF11O14901 512 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 NME2P1O60361 137 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 TBX19O60806 448 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 SNUPNO95149 360 aaKnown RBP8.95□□□□□ -0.98
HDAC3-208ENST00000476739 RASAL1O95294 804 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 PRPS2P11908 318 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 CD46P15529 392 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 NME2P22392 152 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 GNLYP22749 145 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 MST1P26927 711 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 MC3RP41968 323 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 GPR85P60893 370 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 PPP2R2AP63151 447 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 EMX2Q04743 252 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 MRPL49Q13405 166 aaKnown RBP8.95□□□□□ -0.98
HDAC3-208ENST00000476739 NNATQ16517 81 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 ZNF791Q3KP31 576 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-208ENST00000476739 C6orf163Q5TEZ5 329 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 ATG16L1Q676U5 607 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 ZNF324BQ6AW86 544 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-208ENST00000476739 DESI1Q6ICB0 168 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 TMEM107Q6UX40 140 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 LARP4Q71RC2 724 aaKnown RBP eCLIP8.95□□□□□ -0.98
HDAC3-208ENST00000476739 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-208ENST00000476739 SULF2Q8IWU5 870 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 PRR22Q8IZ63 422 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 FAM9CQ8IZT9 166 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 CPSF7Q8N684 471 aaKnown RBP8.95□□□□□ -0.98
HDAC3-208ENST00000476739 OR7G1Q8NGA0 311 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 FAR1Q8WVX9 515 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 PPCDCQ96CD2 204 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 C5orf34Q96MH7 638 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 AMDHD1Q96NU7 426 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 BBS4Q96RK4 519 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 NXF5Q9H1B4 397 aaKnown RBP8.95□□□□□ -0.98
HDAC3-208ENST00000476739 WDR55Q9H6Y2 383 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-208ENST00000476739 SH2D2AQ9NP31 389 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 SLCO1B3Q9NPD5 702 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 GIMAP4Q9NUV9 329 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.95□□□□□ -0.98
HDAC3-208ENST00000476739 SH3BP4Q9P0V3 963 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 ERVK-11Q9UQG0 969 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 RELNP78509 3460 aa8.95□□□□□ -0.98
HDAC3-208ENST00000476739 EXPH5Q8NEV8 1989 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 ASPDHA6ND91 283 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 UPK1AO00322 258 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 CDK2AP1O14519 115 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 SCAMP2O15127 329 aaKnown RBP8.94□□□□□ -0.98
HDAC3-208ENST00000476739 WISP1O95388 367 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 CBX6O95503 412 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 ALDOCP09972 364 aaKnown RBP8.94□□□□□ -0.98
HDAC3-208ENST00000476739 FBXO45P0C2W1 286 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 CCL3P10147 92 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 LAMP1P11279 417 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 MAPK1P28482 360 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 EPHA3P29320 983 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 NTSP30990 170 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 MPIP34949 423 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 RFC3P40938 356 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 FRKP42685 505 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-208ENST00000476739 ASMTP46597 345 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 TDGF1P3P51864 188 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 IRX1P78414 480 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-208ENST00000476739 HSPB3Q12988 150 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 SLC9B1Q4ZJI4 515 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 RNFT1Q5M7Z0 435 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 FAM180AQ6UWF9 173 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 WDR53Q7Z5U6 358 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-208ENST00000476739 TRIM42Q8IWZ5 723 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 RIMKLAQ8IXN7 391 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 SAMD14Q8IZD0 417 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-208ENST00000476739 HORMAD2Q8N7B1 307 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 TMEM178AQ8NBL3 297 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 PSD4Q8NDX1 1056 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 OR10G3Q8NGC4 313 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 OR5M3Q8NGP4 307 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 SLC22A8Q8TCC7 542 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 TP53INP1Q96A56 240 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 SPACA9Q96E40 222 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-208ENST00000476739 ELP4Q96EB1 424 aa8.94□□□□□ -0.98
HDAC3-208ENST00000476739 ZNF764Q96H86 408 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms