RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 TUBB1Q9H4B7 451 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 IL1RL2Q9HB29 575 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 RRAGDQ9NQL2 400 aaPredicted RBP19.48■□□□□ 0.71
LIME1-204ENST00000476183 PFDN4Q9NQP4 134 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 BCAP29Q9UHQ4 241 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 CNOT11Q9UKZ1 510 aaKnown RBP19.48■□□□□ 0.71
LIME1-204ENST00000476183 FIS1Q9Y3D6 152 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 NCOA6Q14686 2063 aaPredicted RBP19.48■□□□□ 0.71
LIME1-204ENST00000476183 TYROBPO43914 113 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 DDCP20711 480 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 FBXW4P57775 412 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 ADORA2A-AS1P86434 159 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 KIAA0040Q15053 153 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 CEBPEQ15744 281 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 KANK2Q63ZY3 851 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 FAM71E1Q6IPT2 247 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 RGS9BPQ6ZS82 235 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 Q6ZSR9 355 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 ZCCHC23Q6ZST2 131 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 NCCRP1Q6ZVX7 275 aaPredicted RBP19.47■□□□□ 0.71
LIME1-204ENST00000476183 SLC22A16Q86VW1 577 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 DOLPP1Q86YN1 238 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 PRR22Q8IZ63 422 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 C17orf47Q8NEP4 570 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 OR52R1Q8NGF1 315 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 OR9A2Q8NGT5 310 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 OR2T11Q8NH01 316 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 CDC26Q8NHZ8 85 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 ZNF675Q8TD23 568 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 PHF12Q96QT6 1004 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 ITPAQ9BY32 194 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 ANKRA2Q9H9E1 313 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 SLC35C2Q9NQQ7 365 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 RYDENQ9NUL5 291 aaKnown RBP19.47■□□□□ 0.71
LIME1-204ENST00000476183 EHD3Q9NZN3 535 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 SUCOQ9UBS9 1254 aaKnown RBP19.47■□□□□ 0.71
LIME1-204ENST00000476183 EXO1Q9UQ84 846 aaKnown RBP19.47■□□□□ 0.71
LIME1-204ENST00000476183 NPFFR2Q9Y5X5 522 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 LIPGQ9Y5X9 500 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.47■□□□□ 0.71
LIME1-204ENST00000476183 NOTCH2Q04721 2471 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 CELSR2Q9HCU4 2923 aa19.47■□□□□ 0.71
LIME1-204ENST00000476183 TMEM233B4DJY2 109 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 NPIPB8E9PQR5 432 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 ACOT7O00154 380 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 NPHS1O60500 1241 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 CELA3AP09093 270 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 PRPH2P23942 346 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 ARRB2P32121 409 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 PTGS2P35354 604 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 MAGEA5P43359 124 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 GSTM5P46439 218 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 EMDP50402 254 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 C2orf80Q0P641 193 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 NNATQ16517 81 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 HYAL4Q2M3T9 481 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 KRT71Q3SY84 523 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 ARL13AQ5H913 290 aaPredicted RBP19.46■□□□□ 0.71
LIME1-204ENST00000476183 NOXRED1Q6NXP6 359 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 C3P1Q6ZMU1 363 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 FAM76AQ8TAV0 307 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 KAT2AQ92830 837 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 MYNNQ9NPC7 610 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 MEMO1Q9Y316 297 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 HRH3Q9Y5N1 445 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 DNAJC15Q9Y5T4 150 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 NCKAP5O14513 1909 aa19.46■□□□□ 0.71
LIME1-204ENST00000476183 LRRC3CA6NJW4 275 aa19.45■□□□□ 0.7
LIME1-204ENST00000476183 SLC28A1O00337 649 aa19.45■□□□□ 0.7
LIME1-204ENST00000476183 ADAM10O14672 748 aa19.45■□□□□ 0.7
LIME1-204ENST00000476183 NME6O75414 186 aaPredicted RBP19.45■□□□□ 0.7
LIME1-204ENST00000476183 TACR1P25103 407 aa19.45■□□□□ 0.7
LIME1-204ENST00000476183 ETV4P43268 484 aa19.45■□□□□ 0.7
LIME1-204ENST00000476183 RPS6KA2Q15349 733 aa19.45■□□□□ 0.7
LIME1-204ENST00000476183 UGT3A2Q3SY77 523 aa19.45■□□□□ 0.7
LIME1-204ENST00000476183 BICRALQ6AI39 1079 aa19.45■□□□□ 0.7
LIME1-204ENST00000476183 RNF165Q6ZSG1 346 aa19.45■□□□□ 0.7
LIME1-204ENST00000476183 TICAM1Q8IUC6 712 aa19.45■□□□□ 0.7
LIME1-204ENST00000476183 FAM57AQ8TBR7 257 aa19.45■□□□□ 0.7
LIME1-204ENST00000476183 ZBTB9Q96C00 473 aa19.45■□□□□ 0.7
LIME1-204ENST00000476183 LRTM1Q9HBL6 345 aa19.45■□□□□ 0.7
LIME1-204ENST00000476183 CNIH4Q9P003 139 aa19.45■□□□□ 0.7
LIME1-204ENST00000476183 ENTPD4Q9Y227 616 aa19.45■□□□□ 0.7
LIME1-204ENST00000476183 CFL2Q9Y281 166 aa19.45■□□□□ 0.7
LIME1-204ENST00000476183 ITPR2Q14571 2701 aa19.44■□□□□ 0.7
LIME1-204ENST00000476183 PRRG2O14669 202 aa19.44■□□□□ 0.7
LIME1-204ENST00000476183 SEC22BO75396 215 aa19.44■□□□□ 0.7
LIME1-204ENST00000476183 BPGMP07738 259 aa19.44■□□□□ 0.7
LIME1-204ENST00000476183 FGF4P08620 206 aa19.44■□□□□ 0.7
LIME1-204ENST00000476183 RFPL3SP0C7P2 107 aa19.44■□□□□ 0.7
LIME1-204ENST00000476183 LINC00032P0C843 101 aa19.44■□□□□ 0.7
LIME1-204ENST00000476183 ESRRAP11474 423 aaPredicted RBP19.44■□□□□ 0.7
LIME1-204ENST00000476183 ABCD3P28288 659 aa19.44■□□□□ 0.7
LIME1-204ENST00000476183 KCNJ2P63252 427 aa19.44■□□□□ 0.7
LIME1-204ENST00000476183 MTFR2Q6P444 385 aa19.44■□□□□ 0.7
LIME1-204ENST00000476183 ARHGAP11AQ6P4F7 1023 aa19.44■□□□□ 0.7
LIME1-204ENST00000476183 MRGPRGQ86SM5 289 aa19.44■□□□□ 0.7
LIME1-204ENST00000476183 CD163Q86VB7 1156 aa19.44■□□□□ 0.7
LIME1-204ENST00000476183 SAMD14Q8IZD0 417 aaPredicted RBP19.44■□□□□ 0.7
LIME1-204ENST00000476183 FAM109AQ8N4B1 249 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms