RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 NINJ1Q92982 152 aa9.08□□□□□ -0.96
PTPN7-208ENST00000476061 CTHRC1Q96CG8 243 aa9.08□□□□□ -0.96
PTPN7-208ENST00000476061 HSPBAP1Q96EW2 488 aa9.08□□□□□ -0.96
PTPN7-208ENST00000476061 LRRC46Q96FV0 321 aa9.08□□□□□ -0.96
PTPN7-208ENST00000476061 JSRP1Q96MG2 331 aaPredicted RBP9.08□□□□□ -0.96
PTPN7-208ENST00000476061 RILPQ96NA2 401 aa9.08□□□□□ -0.96
PTPN7-208ENST00000476061 PAFAH2Q99487 392 aa9.08□□□□□ -0.96
PTPN7-208ENST00000476061 TIMP4Q99727 224 aa9.08□□□□□ -0.96
PTPN7-208ENST00000476061 MRPL1Q9BYD6 325 aaKnown RBP9.08□□□□□ -0.96
PTPN7-208ENST00000476061 SLC6A15Q9H2J7 730 aa9.08□□□□□ -0.96
PTPN7-208ENST00000476061 ELOVL6Q9H5J4 265 aa9.08□□□□□ -0.96
PTPN7-208ENST00000476061 ALKBH4Q9NXW9 302 aa9.08□□□□□ -0.96
PTPN7-208ENST00000476061 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.08□□□□□ -0.96
PTPN7-208ENST00000476061 TRPS1Q9UHF7 1281 aa9.08□□□□□ -0.96
PTPN7-208ENST00000476061 ZNF639Q9UID6 485 aa9.08□□□□□ -0.96
PTPN7-208ENST00000476061 PSME2Q9UL46 239 aa9.08□□□□□ -0.96
PTPN7-208ENST00000476061 SNX6Q9UNH7 406 aa9.08□□□□□ -0.96
PTPN7-208ENST00000476061 C15orf41Q9Y2V0 281 aa9.08□□□□□ -0.96
PTPN7-208ENST00000476061 V9GYY5 206 aaPredicted RBP9.08□□□□□ -0.96
PTPN7-208ENST00000476061 MED13LQ71F56 2210 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 C15orf38-AP3S2A0A0A6YYH1 394 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 A0A1W2PS29 197 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 FAM221AA4D161 298 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 CD8B2A6NJW9 211 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 DVL2O14641 736 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 ACOX3O15254 700 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 CTAG2O75638 210 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 PPM1BO75688 479 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 ZWINTO95229 277 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 ACSL3O95573 720 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 SBK3P0C264 359 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 FAM153BP0C7A2 387 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 HSD3B1P14060 373 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 NT5EP21589 574 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 HSD3B2P26439 372 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 ABCD3P28288 659 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 MASP1P48740 699 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 DLX5P56178 289 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 FBXW4P57775 412 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 DCAF7P61962 342 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 MGAT2Q10469 447 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 GALNT1Q10472 559 aaPredicted RBP9.07□□□□□ -0.96
PTPN7-208ENST00000476061 SNTA1Q13424 505 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 ERCC6LQ2NKX8 1250 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 FAM153CQ494X1 144 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 ACSF3Q4G176 576 aaPredicted RBP9.07□□□□□ -0.96
PTPN7-208ENST00000476061 UBAP2Q5T6F2 1119 aaKnown RBP9.07□□□□□ -0.96
PTPN7-208ENST00000476061 LGSNQ5TDP6 509 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 TIGD3Q6B0B8 471 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 SLC30A6Q6NXT4 461 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 COMMD6Q7Z4G1 85 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 TMEM200AQ86VY9 491 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 VWA5B2Q8N398 1253 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 DCAKDQ8WVC6 231 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 SELENOMQ8WWX9 145 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.07□□□□□ -0.96
PTPN7-208ENST00000476061 TM4SF18Q96CE8 201 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 NSUN5Q96P11 429 aaKnown RBP9.07□□□□□ -0.96
PTPN7-208ENST00000476061 FAIM2Q9BWQ8 316 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 MAT2BQ9NZL9 334 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 SLC12A4Q9UP95 1085 aa9.07□□□□□ -0.96
PTPN7-208ENST00000476061 OTOGQ6ZRI0 2925 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 A0A087WUV0 522 aaPredicted RBP9.06□□□□□ -0.96
PTPN7-208ENST00000476061 MBD3L4A6NDZ8 208 aaPredicted RBP9.06□□□□□ -0.96
PTPN7-208ENST00000476061 MBD3L3A6NE82 208 aaPredicted RBP9.06□□□□□ -0.96
PTPN7-208ENST00000476061 MBD3L5A6NJ08 208 aaPredicted RBP9.06□□□□□ -0.96
PTPN7-208ENST00000476061 A8MT66 165 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 TRIM49D1C9J1S8 452 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 TO15178 435 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 TRAPPC6AO75865 159 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 BCAS2O75934 225 aaPredicted RBP9.06□□□□□ -0.96
PTPN7-208ENST00000476061 ACTL6AO96019 429 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 PDYNP01213 254 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 IL2RAP01589 272 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 ABCB1P08183 1280 aaPredicted RBP9.06□□□□□ -0.96
PTPN7-208ENST00000476061 SNRPAP09012 282 aaKnown RBP9.06□□□□□ -0.96
PTPN7-208ENST00000476061 KRT15P19012 456 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 DRD5P21918 477 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 PTPN6P29350 595 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 DNAJA1P31689 397 aaKnown RBP9.06□□□□□ -0.96
PTPN7-208ENST00000476061 PPICP45877 212 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 TRPC1P48995 793 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 ASCL1P50553 236 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 VSNL1P62760 191 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 PSPHP78330 225 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 CSTF3Q12996 717 aaKnown RBP9.06□□□□□ -0.96
PTPN7-208ENST00000476061 NSUN5P2Q63ZY6 315 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 LETMD1Q6P1Q0 360 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 POMZP3Q6PJE2 187 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 TMEM64Q6YI46 380 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 TIFABQ6ZNK6 161 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 TRMT10CQ7L0Y3 403 aaKnown RBP9.06□□□□□ -0.96
PTPN7-208ENST00000476061 WDR53Q7Z5U6 358 aaPredicted RBP9.06□□□□□ -0.96
PTPN7-208ENST00000476061 SAMD14Q8IZD0 417 aaPredicted RBP9.06□□□□□ -0.96
PTPN7-208ENST00000476061 RELL2Q8NC24 303 aaPredicted RBP9.06□□□□□ -0.96
PTPN7-208ENST00000476061 OR1J4Q8NGS1 313 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 MBD3L2Q8NHZ7 208 aaPredicted RBP9.06□□□□□ -0.96
PTPN7-208ENST00000476061 ZPLD1Q8TCW7 415 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 ZNF675Q8TD23 568 aa9.06□□□□□ -0.96
PTPN7-208ENST00000476061 RNASE6Q93091 150 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms