RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 NTMT1Q9BV86 223 aa12.23□□□□□ -0.45
COPS7B-219ENST00000474042 NXF5Q9H1B4 397 aaKnown RBP12.23□□□□□ -0.45
COPS7B-219ENST00000474042 FETUBQ9UGM5 382 aa12.23□□□□□ -0.45
COPS7B-219ENST00000474042 CAMK2AQ9UQM7 478 aa12.23□□□□□ -0.45
COPS7B-219ENST00000474042 DTX4Q9Y2E6 619 aa12.23□□□□□ -0.45
COPS7B-219ENST00000474042 MPDZO75970 2070 aa12.23□□□□□ -0.45
COPS7B-219ENST00000474042 CDH16O75309 829 aa12.22□□□□□ -0.45
COPS7B-219ENST00000474042 PPM1BO75688 479 aa12.22□□□□□ -0.45
COPS7B-219ENST00000474042 TRAPPC6AO75865 159 aa12.22□□□□□ -0.45
COPS7B-219ENST00000474042 IL2RAP01589 272 aa12.22□□□□□ -0.45
COPS7B-219ENST00000474042 ABCB1P08183 1280 aaPredicted RBP12.22□□□□□ -0.45
COPS7B-219ENST00000474042 NAGAP17050 411 aa12.22□□□□□ -0.45
COPS7B-219ENST00000474042 HOXB4P17483 251 aaPredicted RBP12.22□□□□□ -0.45
COPS7B-219ENST00000474042 BMP7P18075 431 aa12.22□□□□□ -0.45
COPS7B-219ENST00000474042 NT5EP21589 574 aa12.22□□□□□ -0.45
COPS7B-219ENST00000474042 MAGEA12P43365 314 aa12.22□□□□□ -0.45
COPS7B-219ENST00000474042 FOXD4Q12950 439 aaPredicted RBP12.22□□□□□ -0.45
COPS7B-219ENST00000474042 SF3B4Q15427 424 aaKnown RBP eCLIP12.22□□□□□ -0.45
COPS7B-219ENST00000474042 GGTA1PQ4G0N0 100 aa12.22□□□□□ -0.45
COPS7B-219ENST00000474042 WIPI1Q5MNZ9 446 aaPredicted RBP12.22□□□□□ -0.45
COPS7B-219ENST00000474042 FRG2Q64ET8 278 aa12.22□□□□□ -0.45
COPS7B-219ENST00000474042 TIGD3Q6B0B8 471 aa12.22□□□□□ -0.45
COPS7B-219ENST00000474042 ZNF572Q7Z3I7 529 aaPredicted RBP12.22□□□□□ -0.45
COPS7B-219ENST00000474042 CAMKMTQ7Z624 323 aa12.22□□□□□ -0.45
COPS7B-219ENST00000474042 PLD6Q8N2A8 252 aaKnown RBP12.22□□□□□ -0.45
COPS7B-219ENST00000474042 VWA5B2Q8N398 1253 aa12.22□□□□□ -0.45
COPS7B-219ENST00000474042 PTGR2Q8N8N7 351 aaPredicted RBP12.22□□□□□ -0.45
COPS7B-219ENST00000474042 FAM83FQ8NEG4 500 aaPredicted RBP12.22□□□□□ -0.45
COPS7B-219ENST00000474042 GOT1L1Q8NHS2 421 aaPredicted RBP12.22□□□□□ -0.45
COPS7B-219ENST00000474042 HGDQ93099 445 aa12.22□□□□□ -0.45
COPS7B-219ENST00000474042 FRG2BQ96QU4 278 aa12.22□□□□□ -0.45
COPS7B-219ENST00000474042 MRPL1Q9BYD6 325 aaKnown RBP12.22□□□□□ -0.45
COPS7B-219ENST00000474042 NOL11Q9H8H0 719 aaKnown RBP12.22□□□□□ -0.45
COPS7B-219ENST00000474042 ZBTB26Q9HCK0 441 aa12.22□□□□□ -0.45
COPS7B-219ENST00000474042 MAT2BQ9NZL9 334 aa12.22□□□□□ -0.45
COPS7B-219ENST00000474042 JKAMPQ9P055 326 aa12.22□□□□□ -0.45
COPS7B-219ENST00000474042 ZNF639Q9UID6 485 aa12.22□□□□□ -0.45
COPS7B-219ENST00000474042 PCTPQ9UKL6 214 aa12.22□□□□□ -0.45
COPS7B-219ENST00000474042 CES1P1Q9UKY3 287 aa12.22□□□□□ -0.45
COPS7B-219ENST00000474042 NAV3Q8IVL0 2385 aa12.22□□□□□ -0.45
COPS7B-219ENST00000474042 STX16-NPEPL1H3BU86 382 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 STX16O14662 325 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 GNB5O14775 395 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 SNPHO15079 494 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 GOSR1O95249 250 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 IL18BPO95998 194 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 ACTL6AO96019 429 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 ATP1B1P05026 303 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 KLK1P06870 262 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 RHOXF2BP0C7M4 288 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 PORP16435 677 aaPredicted RBP12.21□□□□□ -0.45
COPS7B-219ENST00000474042 CTSSP25774 331 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 TYK2P29597 1187 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 SOX18P35713 384 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 PTGDSP41222 190 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 XKP51811 444 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 CCNG1P51959 295 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 NAGLUP54802 743 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 PPP2R2AP63151 447 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 MGAT2Q10469 447 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 PRICKLE4Q2TBC4 344 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 UBAP2Q5T6F2 1119 aaKnown RBP12.21□□□□□ -0.45
COPS7B-219ENST00000474042 C6orf163Q5TEZ5 329 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 SLC48A1Q6P1K1 146 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 ANGPTL8Q6UXH0 198 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 PAGE2Q7Z2X7 111 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 COMMD6Q7Z4G1 85 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 KIF18BQ86Y91 864 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 METTL4Q8N3J2 472 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 C9orf106Q8NAJ2 232 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 MRRFQ96E11 262 aaKnown RBP12.21□□□□□ -0.45
COPS7B-219ENST00000474042 NSUN5Q96P11 429 aaKnown RBP12.21□□□□□ -0.45
COPS7B-219ENST00000474042 TRIB1Q96RU8 372 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 OSBPL11Q9BXB4 747 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 ITPAQ9BY32 194 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 ACSS3Q9H6R3 686 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 METTL7AQ9H8H3 244 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 CALHM2Q9HA72 323 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 ZDHHC18Q9NUE0 388 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 TMCO1Q9UM00 188 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 EDARQ9UNE0 448 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 PCDHA9Q9Y5H5 950 aa12.21□□□□□ -0.45
COPS7B-219ENST00000474042 MED12LQ86YW9 2145 aa12.2□□□□□ -0.46
COPS7B-219ENST00000474042 C1orf226A1L170 272 aa12.2□□□□□ -0.46
COPS7B-219ENST00000474042 TUBAL3A6NHL2 446 aa12.2□□□□□ -0.46
COPS7B-219ENST00000474042 ACOX3O15254 700 aa12.2□□□□□ -0.46
COPS7B-219ENST00000474042 ATE1O95260 518 aa12.2□□□□□ -0.46
COPS7B-219ENST00000474042 CBX7O95931 251 aa12.2□□□□□ -0.46
COPS7B-219ENST00000474042 RAF1P04049 648 aa12.2□□□□□ -0.46
COPS7B-219ENST00000474042 RPS17P08708 135 aaKnown RBP12.2□□□□□ -0.46
COPS7B-219ENST00000474042 EPXP11678 715 aa12.2□□□□□ -0.46
COPS7B-219ENST00000474042 KRT15P19012 456 aa12.2□□□□□ -0.46
COPS7B-219ENST00000474042 OPRM1P35372 400 aa12.2□□□□□ -0.46
COPS7B-219ENST00000474042 ARL1P40616 181 aaPredicted RBP12.2□□□□□ -0.46
COPS7B-219ENST00000474042 MAPK12P53778 367 aa12.2□□□□□ -0.46
COPS7B-219ENST00000474042 DUSP2Q05923 314 aa12.2□□□□□ -0.46
COPS7B-219ENST00000474042 GALNT1Q10472 559 aaPredicted RBP12.2□□□□□ -0.46
COPS7B-219ENST00000474042 MAP4K2Q12851 820 aa12.2□□□□□ -0.46
COPS7B-219ENST00000474042 SNTA1Q13424 505 aa12.2□□□□□ -0.46
COPS7B-219ENST00000474042 NNATQ16517 81 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms