RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 ULK2Q8IYT8 1036 aa12.4□□□□□ -0.42
BRAT1-205ENST00000473879 FBXW8Q8N3Y1 598 aa12.4□□□□□ -0.42
BRAT1-205ENST00000473879 TMEM52Q8NDY8 209 aa12.4□□□□□ -0.42
BRAT1-205ENST00000473879 PSMA8Q8TAA3 256 aa12.4□□□□□ -0.42
BRAT1-205ENST00000473879 UCN3Q969E3 161 aa12.4□□□□□ -0.42
BRAT1-205ENST00000473879 TMEM125Q96AQ2 219 aa12.4□□□□□ -0.42
BRAT1-205ENST00000473879 FER1L6-AS2Q96M78 137 aa12.4□□□□□ -0.42
BRAT1-205ENST00000473879 ZNF681Q96N22 645 aa12.4□□□□□ -0.42
BRAT1-205ENST00000473879 CPPED1Q9BRF8 314 aaPredicted RBP12.4□□□□□ -0.42
BRAT1-205ENST00000473879 PELOQ9BRX2 385 aaKnown RBP12.4□□□□□ -0.42
BRAT1-205ENST00000473879 RBCK1Q9BYM8 510 aa12.4□□□□□ -0.42
BRAT1-205ENST00000473879 TGIF2Q9GZN2 237 aa12.4□□□□□ -0.42
BRAT1-205ENST00000473879 GLIPR2Q9H4G4 154 aa12.4□□□□□ -0.42
BRAT1-205ENST00000473879 RAD21L1Q9H4I0 556 aa12.4□□□□□ -0.42
BRAT1-205ENST00000473879 NANOGQ9H9S0 305 aa12.4□□□□□ -0.42
BRAT1-205ENST00000473879 SLAMF7Q9NQ25 335 aa12.4□□□□□ -0.42
BRAT1-205ENST00000473879 C14orf105Q9NVL8 296 aa12.4□□□□□ -0.42
BRAT1-205ENST00000473879 SLAMF8Q9P0V8 285 aa12.4□□□□□ -0.42
BRAT1-205ENST00000473879 ANAPC2Q9UJX6 822 aa12.4□□□□□ -0.42
BRAT1-205ENST00000473879 MMACHCQ9Y4U1 282 aa12.4□□□□□ -0.42
BRAT1-205ENST00000473879 CCDC88CQ9P219 2028 aa12.4□□□□□ -0.42
BRAT1-205ENST00000473879 ZNF462Q96JM2 2506 aa12.4□□□□□ -0.42
BRAT1-205ENST00000473879 CROCCQ5TZA2 2017 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 FAM227AF5H4B4 570 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 K7EM74 188 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 CLIC1O00299 241 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 PEX12O00623 359 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 NME4O00746 187 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 FGF17O60258 216 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 B4GALT2O60909 372 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 KRT75O95678 551 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 C8orf89P0DMQ9 161 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 CPMP14384 443 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 MMP11P24347 488 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 CHI3L1P36222 383 aaPredicted RBP12.39□□□□□ -0.43
BRAT1-205ENST00000473879 FEN1P39748 380 aaKnown RBP12.39□□□□□ -0.43
BRAT1-205ENST00000473879 EFNA3P52797 238 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 EEFSECP57772 596 aaKnown RBP12.39□□□□□ -0.43
BRAT1-205ENST00000473879 FOXL2P58012 376 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 OCA2Q04671 838 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 STX4Q12846 297 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 SERTAD2Q14140 314 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 SPDYE7PQ495Y7 208 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 GTDC1Q4AE62 458 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 C6orf163Q5TEZ5 329 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 FAM180BQ6P0A1 224 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 BHLHB9Q6PI77 547 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 TMEM64Q6YI46 380 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 QSOX2Q6ZRP7 698 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 ASB18Q6ZVZ8 466 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 ZNF551Q7Z340 670 aaPredicted RBP12.39□□□□□ -0.43
BRAT1-205ENST00000473879 PRICKLE2Q7Z3G6 844 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 PPP1R32Q7Z5V6 425 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 TMEM151BQ8IW70 566 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 MSRB3Q8IXL7 192 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 SLC15A3Q8IY34 581 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 CCDC116Q8IYX3 515 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 SUN3Q8TAQ9 357 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 SFXN5Q8TD22 340 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 MOAP1Q96BY2 351 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 SLC35A5Q9BS91 424 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 THUMPD3Q9BV44 507 aaKnown RBP12.39□□□□□ -0.43
BRAT1-205ENST00000473879 P4HTMQ9NXG6 502 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 SLC25A37Q9NYZ2 338 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 CTSFQ9UBX1 484 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 RRP15Q9Y3B9 282 aaKnown RBP12.39□□□□□ -0.43
BRAT1-205ENST00000473879 PCDHGB7Q9Y5F8 929 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 SNX8Q9Y5X2 465 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 GMEB1Q9Y692 573 aa12.39□□□□□ -0.43
BRAT1-205ENST00000473879 RNF103-CHMP3A0A140T963 221 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 WASHC1A8K0Z3 465 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 H0YHG0 523 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 J3QKU1 62 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 OR10H2O60403 315 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 LDB3O75112 727 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 CDC123O75794 336 aaPredicted RBP12.38□□□□□ -0.43
BRAT1-205ENST00000473879 ATP1B1P05026 303 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 IFI6P09912 130 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 SLC35E2P0CK97 266 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 ME2P23368 584 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 CDK9P50750 372 aaKnown RBP12.38□□□□□ -0.43
BRAT1-205ENST00000473879 CORO7P57737 925 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 MTPNP58546 118 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 IGLV3-21P80748 117 aaPredicted RBP12.38□□□□□ -0.43
BRAT1-205ENST00000473879 PRR5P85299 388 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 KLRB1Q12918 225 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 GAB1Q13480 694 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 PIGGQ5H8A4 983 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 RABL3Q5HYI8 236 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 DCAF10Q5QP82 559 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 MFSD4BQ5TF39 518 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 ZC3H7AQ8IWR0 971 aaKnown RBP12.38□□□□□ -0.43
BRAT1-205ENST00000473879 SHISA5Q8N114 240 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 TNIP2Q8NFZ5 429 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 STT3BQ8TCJ2 826 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 ZFP90Q8TF47 636 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 UTP4Q969X6 686 aaKnown RBP12.38□□□□□ -0.43
BRAT1-205ENST00000473879 ANKRD9Q96BM1 317 aaPredicted RBP12.38□□□□□ -0.43
BRAT1-205ENST00000473879 ECSITQ9BQ95 431 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 SPATA9Q9BWV2 254 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms