RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 CBX7O95931 251 aa20.74■□□□□ 0.91
PTP4A1-203ENST00000473334 IGHG3P01860 377 aa20.74■□□□□ 0.91
PTP4A1-203ENST00000473334 UROSP10746 265 aa20.74■□□□□ 0.91
PTP4A1-203ENST00000473334 AGAP20933 346 aa20.74■□□□□ 0.91
PTP4A1-203ENST00000473334 SOX18P35713 384 aa20.74■□□□□ 0.91
PTP4A1-203ENST00000473334 ZNF763Q0D2J5 394 aa20.74■□□□□ 0.91
PTP4A1-203ENST00000473334 EXOSC7Q15024 291 aaKnown RBP20.74■□□□□ 0.91
PTP4A1-203ENST00000473334 TMEM64Q6YI46 380 aa20.74■□□□□ 0.91
PTP4A1-203ENST00000473334 C3P1Q6ZMU1 363 aa20.74■□□□□ 0.91
PTP4A1-203ENST00000473334 SRRM1Q8IYB3 904 aaKnown RBP20.74■□□□□ 0.91
PTP4A1-203ENST00000473334 SLC34A3Q8N130 599 aa20.74■□□□□ 0.91
PTP4A1-203ENST00000473334 OR5M3Q8NGP4 307 aa20.74■□□□□ 0.91
PTP4A1-203ENST00000473334 EXOSC8Q96B26 276 aaKnown RBP20.74■□□□□ 0.91
PTP4A1-203ENST00000473334 DMRTA2Q96SC8 542 aa20.74■□□□□ 0.91
PTP4A1-203ENST00000473334 SHCBP1LQ9BZQ2 653 aa20.74■□□□□ 0.91
PTP4A1-203ENST00000473334 PROK2Q9HC23 129 aa20.74■□□□□ 0.91
PTP4A1-203ENST00000473334 RRAGDQ9NQL2 400 aaPredicted RBP20.74■□□□□ 0.91
PTP4A1-203ENST00000473334 GIMAP4Q9NUV9 329 aa20.74■□□□□ 0.91
PTP4A1-203ENST00000473334 EHD3Q9NZN3 535 aa20.74■□□□□ 0.91
PTP4A1-203ENST00000473334 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.74■□□□□ 0.91
PTP4A1-203ENST00000473334 ENTPD4Q9Y227 616 aa20.74■□□□□ 0.91
PTP4A1-203ENST00000473334 DTX4Q9Y2E6 619 aa20.74■□□□□ 0.91
PTP4A1-203ENST00000473334 V9GYY5 206 aaPredicted RBP20.74■□□□□ 0.91
PTP4A1-203ENST00000473334 ADAM10O14672 748 aa20.73■□□□□ 0.91
PTP4A1-203ENST00000473334 TRIM13O60858 407 aa20.73■□□□□ 0.91
PTP4A1-203ENST00000473334 RSL1D1O76021 490 aaKnown RBP20.73■□□□□ 0.91
PTP4A1-203ENST00000473334 DUSP8Q13202 625 aa20.73■□□□□ 0.91
PTP4A1-203ENST00000473334 TBCELQ5QJ74 424 aa20.73■□□□□ 0.91
PTP4A1-203ENST00000473334 NCCRP1Q6ZVX7 275 aaPredicted RBP20.73■□□□□ 0.91
PTP4A1-203ENST00000473334 FAM76AQ8TAV0 307 aa20.73■□□□□ 0.91
PTP4A1-203ENST00000473334 ZNF675Q8TD23 568 aa20.73■□□□□ 0.91
PTP4A1-203ENST00000473334 TRMOQ9BU70 441 aa20.73■□□□□ 0.91
PTP4A1-203ENST00000473334 GATA5Q9BWX5 397 aaPredicted RBP20.73■□□□□ 0.91
PTP4A1-203ENST00000473334 ITPAQ9BY32 194 aa20.73■□□□□ 0.91
PTP4A1-203ENST00000473334 NXF5Q9H1B4 397 aaKnown RBP20.73■□□□□ 0.91
PTP4A1-203ENST00000473334 ZFP64Q9NPA5 681 aa20.73■□□□□ 0.91
PTP4A1-203ENST00000473334 LIPGQ9Y5X9 500 aa20.73■□□□□ 0.91
PTP4A1-203ENST00000473334 PCNX1Q96RV3 2341 aa20.73■□□□□ 0.91
PTP4A1-203ENST00000473334 CELSR2Q9HCU4 2923 aa20.73■□□□□ 0.91
PTP4A1-203ENST00000473334 LRATO95237 230 aa20.72■□□□□ 0.91
PTP4A1-203ENST00000473334 PCSK2P16519 638 aa20.72■□□□□ 0.91
PTP4A1-203ENST00000473334 FBXW4P57775 412 aa20.72■□□□□ 0.91
PTP4A1-203ENST00000473334 SLC10A1Q14973 349 aa20.72■□□□□ 0.91
PTP4A1-203ENST00000473334 TRMT12Q53H54 448 aaKnown RBP20.72■□□□□ 0.91
PTP4A1-203ENST00000473334 ZNF628Q5EBL2 1059 aa20.72■□□□□ 0.91
PTP4A1-203ENST00000473334 CLEC6AQ6EIG7 209 aa20.72■□□□□ 0.91
PTP4A1-203ENST00000473334 TRILQ7L0X0 811 aa20.72■□□□□ 0.91
PTP4A1-203ENST00000473334 CCDC116Q8IYX3 515 aa20.72■□□□□ 0.91
PTP4A1-203ENST00000473334 PRR22Q8IZ63 422 aa20.72■□□□□ 0.91
PTP4A1-203ENST00000473334 OR52R1Q8NGF1 315 aa20.72■□□□□ 0.91
PTP4A1-203ENST00000473334 DIO2Q92813 273 aa20.72■□□□□ 0.91
PTP4A1-203ENST00000473334 SECISBP2Q96T21 854 aaKnown RBP20.72■□□□□ 0.91
PTP4A1-203ENST00000473334 DOHHQ9BU89 302 aa20.72■□□□□ 0.91
PTP4A1-203ENST00000473334 TP63Q9H3D4 680 aaPredicted RBP20.72■□□□□ 0.91
PTP4A1-203ENST00000473334 ZNF703Q9H7S9 590 aaPredicted RBP20.72■□□□□ 0.91
PTP4A1-203ENST00000473334 SLC35C2Q9NQQ7 365 aa20.72■□□□□ 0.91
PTP4A1-203ENST00000473334 PRODH2Q9UF12 536 aa20.72■□□□□ 0.91
PTP4A1-203ENST00000473334 DNAJC13O75165 2243 aa20.72■□□□□ 0.91
PTP4A1-203ENST00000473334 CENPEQ02224 2701 aa20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 A0A1B0GVC2 190 aa20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 ATP6AP2A0A1C7CYW4 349 aa20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 ANKRD33BA6NCL7 494 aa20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 OR14I1A6ND48 311 aa20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 LRRC3CA6NJW4 275 aa20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 ATP6AP2O75787 350 aa20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 DDCP20711 480 aa20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 ABCD3P28288 659 aa20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 RPP38P78345 283 aaKnown RBP20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 MRPS35P82673 323 aaKnown RBP20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 C2orf80Q0P641 193 aa20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 CEBPEQ15744 281 aa20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 NNATQ16517 81 aa20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 SIMC1Q8NDZ2 872 aa20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 CDC26Q8NHZ8 85 aa20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 SPPL2AQ8TCT8 520 aa20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 ERP27Q96DN0 273 aa20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 HSPBAP1Q96EW2 488 aa20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 METTL2AQ96IZ6 378 aaKnown RBP20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 LCORQ96JN0 433 aaPredicted RBP20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 ZNF597Q96LX8 424 aa20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 FAM111AQ96PZ2 611 aa20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 SMC6Q96SB8 1091 aa20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 MYNNQ9NPC7 610 aa20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 SLC17A7Q9P2U7 560 aa20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 POLR3HQ9Y535 204 aaPredicted RBP20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 NINQ8N4C6 2090 aa20.71■□□□□ 0.91
PTP4A1-203ENST00000473334 NCKAP5O14513 1909 aa20.7■□□□□ 0.91
PTP4A1-203ENST00000473334 NPIPA2E9PIF3 369 aa20.7■□□□□ 0.9
PTP4A1-203ENST00000473334 NPIPA3F8WFD2 350 aa20.7■□□□□ 0.9
PTP4A1-203ENST00000473334 AZIN1O14977 448 aa20.7■□□□□ 0.9
PTP4A1-203ENST00000473334 SUSD5O60279 629 aa20.7■□□□□ 0.9
PTP4A1-203ENST00000473334 SPAG7O75391 227 aa20.7■□□□□ 0.9
PTP4A1-203ENST00000473334 BCAS2O75934 225 aaPredicted RBP20.7■□□□□ 0.9
PTP4A1-203ENST00000473334 CELA3AP09093 270 aa20.7■□□□□ 0.9
PTP4A1-203ENST00000473334 NAGAP17050 411 aa20.7■□□□□ 0.9
PTP4A1-203ENST00000473334 ALDH3A1P30838 453 aa20.7■□□□□ 0.9
PTP4A1-203ENST00000473334 EMDP50402 254 aa20.7■□□□□ 0.9
PTP4A1-203ENST00000473334 DCAF7P61962 342 aa20.7■□□□□ 0.9
PTP4A1-203ENST00000473334 SP5Q6BEB4 398 aaPredicted RBP20.7■□□□□ 0.9
PTP4A1-203ENST00000473334 FAM71E1Q6IPT2 247 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms