RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 VIMP08670 466 aaKnown RBP8.45□□□□□ -1.06
SMC4-214ENST00000472991 CT62P0C5K7 136 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 EFNA1P20827 205 aaPredicted RBP8.45□□□□□ -1.06
SMC4-214ENST00000472991 NTSP30990 170 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 SSTR4P31391 388 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 GALNSP34059 522 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 RPL3P39023 403 aaKnown RBP8.45□□□□□ -1.06
SMC4-214ENST00000472991 CLCN2P51788 898 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 GPR143P51810 404 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 GYS2P54840 703 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 NME5P56597 212 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 CLDN8P56748 225 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 ZNF267Q14586 743 aaPredicted RBP8.45□□□□□ -1.06
SMC4-214ENST00000472991 CEBPEQ15744 281 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 MPEG1Q2M385 716 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 PRICKLE4Q2TBC4 344 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 LSM12Q3MHD2 195 aaKnown RBP8.45□□□□□ -1.06
SMC4-214ENST00000472991 TMEM198Q66K66 360 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 B3GNTL1Q67FW5 361 aaPredicted RBP8.45□□□□□ -1.06
SMC4-214ENST00000472991 JMJD6Q6NYC1 403 aaPredicted RBP8.45□□□□□ -1.06
SMC4-214ENST00000472991 FAM111BQ6SJ93 734 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 ACAD11Q709F0 780 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 R3HCC1LQ7Z5L2 792 aaKnown RBP8.45□□□□□ -1.06
SMC4-214ENST00000472991 SPATA19Q7Z5L4 167 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 SAMD14Q8IZD0 417 aaPredicted RBP8.45□□□□□ -1.06
SMC4-214ENST00000472991 FAM9CQ8IZT9 166 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 MORN4Q8NDC4 146 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 ADCY4Q8NFM4 1077 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 OR7A2PQ8NGA2 310 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 OR1N1Q8NGS0 311 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 OR9A2Q8NGT5 310 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 CEP70Q8NHQ1 597 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 RFWD2Q8NHY2 731 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 C9orf43Q8TAL5 461 aaPredicted RBP8.45□□□□□ -1.06
SMC4-214ENST00000472991 SUN3Q8TAQ9 357 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 ZNF721Q8TF20 911 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 PSMF1Q92530 271 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 RIT1Q92963 219 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 CIDECQ96AQ7 238 aaPredicted RBP8.45□□□□□ -1.06
SMC4-214ENST00000472991 PPCDCQ96CD2 204 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 ZNF764Q96H86 408 aaPredicted RBP8.45□□□□□ -1.06
SMC4-214ENST00000472991 SENP5Q96HI0 755 aaPredicted RBP8.45□□□□□ -1.06
SMC4-214ENST00000472991 FBXL20Q96IG2 436 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 ART5Q96L15 291 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 UBL7Q96S82 380 aaPredicted RBP8.45□□□□□ -1.06
SMC4-214ENST00000472991 DPY30Q9C005 99 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 BRINP2Q9C0B6 783 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 SLAMF7Q9NQ25 335 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 AIG1Q9NVV5 245 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 MAT2BQ9NZL9 334 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 SH3BP4Q9P0V3 963 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 TUBD1Q9UJT1 453 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 DCTN4Q9UJW0 460 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 G3BP2Q9UN86 482 aaKnown RBP8.45□□□□□ -1.06
SMC4-214ENST00000472991 NINQ8N4C6 2090 aa8.45□□□□□ -1.06
SMC4-214ENST00000472991 FREM3P0C091 2139 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 GABRR3A8MPY1 467 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 A8MUI8 341 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 MYO1GB0I1T2 1018 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 E9PBE3 544 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 ANKRD28O15084 1053 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 UBDO15205 165 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 PRKNO60260 465 aaPredicted RBP8.44□□□□□ -1.06
SMC4-214ENST00000472991 KLHL41O60662 606 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 GHRHP01286 108 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 CLPSP04118 112 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 IGKV3-11P04433 115 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 ALPPP05187 535 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 TROVE2P10155 538 aaKnown RBP eCLIP8.44□□□□□ -1.061e-12■■■■■ 61.2
SMC4-214ENST00000472991 LAMP1P11279 417 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 PRPS1L1P21108 318 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 NCBP2P52298 156 aaKnown RBP eCLIP8.44□□□□□ -1.062e-17■■■■■ 76.5
SMC4-214ENST00000472991 MRPS35P82673 323 aaKnown RBP8.44□□□□□ -1.06
SMC4-214ENST00000472991 SF3A3Q12874 501 aaKnown RBP eCLIP8.44□□□□□ -1.064e-10■■■■■ 210.9
SMC4-214ENST00000472991 EXOSC7Q15024 291 aaKnown RBP8.44□□□□□ -1.06
SMC4-214ENST00000472991 LACTB2Q53H82 288 aaPredicted RBP8.44□□□□□ -1.06
SMC4-214ENST00000472991 CRB2Q5IJ48 1285 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 AGAP7PQ5VUJ5 663 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 CGB2Q6NT52 195 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 TCTN3Q6NUS6 607 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 RNF111Q6ZNA4 994 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 RIMKLAQ8IXN7 391 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 ZNF675Q8TD23 568 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 THAP3Q8WTV1 239 aaPredicted RBP8.44□□□□□ -1.06
SMC4-214ENST00000472991 KAT2AQ92830 837 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 MTERF3Q96E29 417 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 MEGF10Q96KG7 1140 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 AGAP4Q96P64 663 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 SMAD5Q99717 465 aaKnown RBP8.44□□□□□ -1.06
SMC4-214ENST00000472991 NPAS2Q99743 824 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 KRTAP4-8Q9BYQ9 185 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 DEFB126Q9BYW3 111 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 SEMA4CQ9C0C4 833 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 GLIPR2Q9H4G4 154 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 ZBTB20Q9HC78 741 aaPredicted RBP8.44□□□□□ -1.06
SMC4-214ENST00000472991 ZNF71Q9NQZ8 489 aaPredicted RBP8.44□□□□□ -1.06
SMC4-214ENST00000472991 TAS2R7Q9NYW3 318 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 ATP6V1HQ9UI12 483 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 GPR45Q9Y5Y3 372 aa8.44□□□□□ -1.06
SMC4-214ENST00000472991 CHD6Q8TD26 2715 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms